Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1790g00004 ATGGAAAACCGACTCAAAATACGAGTCTCTCGCATGTTCAGATCCTCATTCGGGTCTTGCAGGACCCGAAACTTCTCCGATGTCATGGAAAAAGCTCCACACTACCACCCACCATCCTCACATCTCATGGAGCCCATGTCCCCCAGACTTCGTCCCTTTCCTTCCATCTTCAGACCCAAAGCCTCACAATCTCTTCACACTCCATGCTTTGATTCCCTCTGCGACGACCTCAACGGTAGGTCTTGTCTTCTTGCTTCTCGTAGCTGCGAGAATGAGTTTGATTCTGCCGAGAAAGTGAAAGAATCAGCAAGAAAGAAGAAGGATACGAAGAGGAGGAGGAAGACGACGACGACGAAGAAGAAGAAGAAGGATACCCAGATGAAAATCAATGACAAGGAGACTATTCCGTTCAGTTATAGCAAGAAAGAAGCAGATGATTTTGGAGGGAATTGGTGGTATAGCAGCGACGACGAAGATGACGAGACGGAGACTCTTTTCTCTTCTAAAAGCACCTCGTCTGACTCCTCACAGTCTCGCCGGTTTCGCCGGAGGCATCGGTCTCGCCGGAGAAAGCAGGACGGAAGTCGGATCAGCTCTAAGAAGGGGAATTCTGAGATGGGTGTTCTGCCATTGCAGGTGAAAGTGAAGGATAGCTTCGCCGTGGTGAAACGTTCGAGTGATCCTTACAATGACTTCAGGACGTCAATGGTGGAAATGATAGTGGAGAAACAGATATTTGCTGCAAAGGATTTGGAGAATCTGTTGCAGTGTTTTCTGTCACTGAATTCACATCATCATCACAAGATCATTGTGGAAGTATTCACAGAGATTTATGATGCTCTGTTCTGTGACTGGGTTTAG 861 0.4727 MENRLKIRVSRMFRSSFGSCRTRNFSDVMEKAPHYHPPSSHLMEPMSPRLRPFPSIFRPKASQSLHTPCFDSLCDDLNGRSCLLASRSCENEFDSAEKVKESARKKKDTKRRRKTTTTKKKKKDTQMKINDKETIPFSYSKKEADDFGGNWWYSSDDEDDETETLFSSKSTSSDSSQSRRFRRRHRSRRRKQDGSRISSKKGNSEMGVLPLQVKVKDSFAVVKRSSDPYNDFRTSMVEMIVEKQIFAAKDLENLLQCFLSLNSHHHHKIIVEVFTEIYDALFCDWV 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1790g00004 286 MobiDBLite consensus disorder prediction 105 121 - -
Pral1790g00004 286 ProSiteProfiles OVATE domain profile. 221 280 IPR006458 -
Pral1790g00004 286 MobiDBLite consensus disorder prediction 95 131 - -
Pral1790g00004 286 MobiDBLite consensus disorder prediction 163 203 - -
Pral1790g00004 286 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 100 282 IPR038933 GO:0045892
Pral1790g00004 286 Coils Coil 86 106 - -
Pral1790g00004 286 Pfam Transcriptional repressor, ovate 225 281 IPR006458 -
Pral1790g00004 286 MobiDBLite consensus disorder prediction 179 195 - -
Pral1790g00004 286 NCBIfam uncharacterized plant-specific domain TIGR01568 219 281 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1790g00004 Pral-Chr1790 59191 60216 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pral1790g00004 Ovate 2.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1790g00004 - - qsa:O6P43_007928 259.61