Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral178g00001 ATGGTTGATCAGGTTCATCACCCCACCGTCATACAAAAGGTCGCTGGCCAATTCCATCTCCAATCTGGTCTTTCTGCTGATATTAAAAGTCATGATAACAGTTTCAGTCGACCTGCTCTTTACCAAAGACGATCATTTGGGAATTACTCAAATGCTGCACTTCAGTATCCATCAATGCCAGCATGTAGACCAGCAACTGAAATCTCCTCTATTTCTGCGACAACAGGCTCACCTATCTTTGTTGCTGCTCCAGCTGAGAAAGGAAATTTCGTTGTGGACTTTCTTATGGGTGGAGTTTCCGCTGCTGTATCAAAAACTGCTGCTGCTCCCATTGAACGTGTCAAACTTCTGATACAGAATCAAGATGAGATGATTAAAGCCGGTAGGCTCTCTGAGCCCTATAAGGGTATTGGGGATTGTTTTAACCGAACAATTCAATCTGAAGGTGTTGCTTCCCTATGGAGAGGTAACACTGCCAATGTCATCCGTTATTTCCCCACACAGGCCTTGAACTTTGCTTTCAAGGACTACTTCAAGAGACTTTTCAATTTCAGGAAGGACAAGGATGGTTACTGGAAATGGTTTGCAGGCAACTTGGCCTCTGGAGGAGCTGCTGGTGCTTCATCTCTATTGTTTGTTTACTCCCTCGACTATGCTCGAACCCGTCTGGCAAATGATGCAAAGGCAGCTAAGAAGGGTGGAGGAGAAAGGCAATTCAATGGACTTGTTGATGTCTACAAGAAGACCTTAGCTTCTGATGGTGTTGCTGGCCTTTACCGTGGCTTCAACATCTCATGTGTGGGAATCATTGTGTATCGTGGTCTTTATTTTGGAATGTACGATTCTCTGAAGCCAGTTCTCTTGACTGGAAAGTTACAGGATAGCTTCTTTGCTAGCTTTGCACTGGGATGGCTCATCACCAATGGTGCAGGGCTAGCATCATACCCCATTGATACTGTTAGGAGAAGGATGATGATGACCTCTGGTGAAGCAGTCAAGTACAAGAGTTCCATGGATGCATTTGCTCAGATTCTTAAGAATGAGGGAGCTAAGTCCTTGTTCAAGGGAGCTGGGGCTAACATCCTCCGTGCCGTCGCCGGAGCCGGTGTGCTTGCCGGCTATGACAAGCTACAGGTATTAGTGTTCGGGAAGAAGTATGGATCCGGTGGTGCTTAA 1176 0.46 MVDQVHHPTVIQKVAGQFHLQSGLSADIKSHDNSFSRPALYQRRSFGNYSNAALQYPSMPACRPATEISSISATTGSPIFVAAPAEKGNFVVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMIKAGRLSEPYKGIGDCFNRTIQSEGVASLWRGNTANVIRYFPTQALNFAFKDYFKRLFNFRKDKDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKKGGGERQFNGLVDVYKKTLASDGVAGLYRGFNISCVGIIVYRGLYFGMYDSLKPVLLTGKLQDSFFASFALGWLITNGAGLASYPIDTVRRRMMMTSGEAVKYKSSMDAFAQILKNEGAKSLFKGAGANILRAVAGAGVLAGYDKLQVLVFGKKYGSGGA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral178g00001 391 Gene3D Mitochondrial carrier domain 91 387 IPR023395 -
Pral178g00001 391 SUPERFAMILY Mitochondrial carrier 88 376 IPR023395 -
Pral178g00001 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 193 286 IPR018108 -
Pral178g00001 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 294 380 IPR018108 -
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 156 176 IPR002067 GO:0055085
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 106 120 IPR002067 GO:0055085
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 208 226 IPR002067 GO:0055085
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 93 106 IPR002067 GO:0055085
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 259 277 IPR002067 GO:0055085
Pral178g00001 391 PRINTS Mitochondrial carrier protein signature 303 325 IPR002067 GO:0055085
Pral178g00001 391 Pfam Mitochondrial carrier protein 192 289 IPR018108 -
Pral178g00001 391 Pfam Mitochondrial carrier protein 89 184 IPR018108 -
Pral178g00001 391 Pfam Mitochondrial carrier protein 295 382 IPR018108 -
Pral178g00001 391 FunFam ADP,ATP carrier protein, mitochondrial 91 387 - -
Pral178g00001 391 PRINTS Adenine nucleotide translocator signature 193 206 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral178g00001 391 PRINTS Adenine nucleotide translocator signature 299 315 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral178g00001 391 PRINTS Adenine nucleotide translocator signature 90 102 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral178g00001 391 PRINTS Adenine nucleotide translocator signature 167 179 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral178g00001 391 PRINTS Adenine nucleotide translocator signature 134 155 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Pral178g00001 391 ProSiteProfiles Solute carrier (Solcar) repeat profile. 88 181 IPR018108 -
Pral178g00001 391 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 82 390 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral178g00001 Pral-Chr178 3680 5380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral178g00001 1 391 Antiporters AT5G13490 81.472 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral178g00001 K05863 - qsa:O6P43_029531 659.062