Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1789g00002 ATGTCTTGCTCGCCGGCCGCCGGTGACTTGCTGTGCGGTGAGGTTGCCGATGAAGTTGTCTACGGTGAAAACCAAAGGACGTCGCCGCCGTACTTGCAGCCGTATTCACCTCCTTCAGACGACGCAACCATCGGCGGACTCATCGACGTCGAGGCACAGCACATGCCCGACCCAGATTACCTGCGGCGGTGCCGTTTTCGTTTAATCGACGTAACCGCTCGCCAAGACTCCATCAACTGGATCTTGAAGGTTCGCGCACACTACGAGTTTCGTCCGGTAACGGCGTTCCTCTCAGTCAACTACCTCGATCGTTTTCTGTCTTGCTCTCCACTTCCGCGACAAAGTCAGTGGGAGTATCATCTGCTATCAGTGGCATGCTTGTCTTTAGCGGCGAAAATGGAGGAACCTGAAGTGCCTCTGTTACTGGACCTTCAATTAGTGGATCCCAGATTTGTATTCGAACCCAAAACGATTCAAAGAATGGAGCTGTGTCTCATGACCAAGCTAAGCTGGAGATTACGCTCCATAACACCCTTCGATTATCTCCATTACTTCATCTCTAAGCTCTCTTGCGACCCGCAACCCGATTCCATAGCCCGGCTCTTCTCCGCTGCTTCCAATCTCATCCTCAGCACTGCCCTCGGTACCACATATACCTGA 660 0.5273 MSCSPAAGDLLCGEVADEVVYGENQRTSPPYLQPYSPPSDDATIGGLIDVEAQHMPDPDYLRRCRFRLIDVTARQDSINWILKVRAHYEFRPVTAFLSVNYLDRFLSCSPLPRQSQWEYHLLSVACLSLAAKMEEPEVPLLLDLQLVDPRFVFEPKTIQRMELCLMTKLSWRLRSITPFDYLHYFISKLSCDPQPDSIARLFSAASNLILSTALGTTYT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1789g00002 219 FunFam D2/4-type cyclin 57 174 - -
Pral1789g00002 219 PANTHER CYCLINS 49 192 IPR039361 -
Pral1789g00002 219 Gene3D - 57 174 - -
Pral1789g00002 219 CDD CYCLIN_AtCycD-like_rpt1 73 171 - -
Pral1789g00002 219 SMART cyclin_7 79 167 IPR013763 -
Pral1789g00002 219 SUPERFAMILY Cyclin-like 45 173 IPR036915 -
Pral1789g00002 219 Pfam Cyclin, N-terminal domain 47 173 IPR006671 -
Pral1789g00002 219 ProSitePatterns Cyclins signature. 74 105 IPR006671 -
Pral1789g00002 219 Gene3D - 47 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1789g00002 Pral-Chr1789 11978 12942 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1789g00002 9 212 Core Cell Cycle Gene Families AT1G70210 46.078 6.79e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1789g00002 K18810 - qsa:O6P43_031142 248.825