Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00028 ATGGATTCCACTAAGGCGTTCCTGCTCCTTGCTCTTCTAATCTGTTTCATAGCAAGAATCAAAGCACAGGAACCACAGGTGGATTGTTCAGGCCTTACTTACGCCCCAAACAGCACATATCACTCAAATCTCAATCGCTTGCTTTCAACGCTTTCCTCAAACGCCAATAGCATTGGTGGCTTTTACAACACCACCGTCGGAAAAAACGACGACGCCGTCTACGGCCTCTACCTCTGCCGGGGAGACACCACCGTCTCCGCCTGTCAAGCATGTGTTTCCCGGGCAACCAAAGATATCAGGCAATGCCTCAATTCTACCCAAGCCGTGGGTTGGTACGACAAGTGCATGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGACCCCACTCTCGTCCTCCACAACAGCGGCAACGCATCAGACCCCAAAAGCTTTATGCAACTGTGCACACCGGATATATCTAGAGATGACTGTTATAACTGTTTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGCTAGGGGCAATCGCACGCGCCTTCAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTATGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCACTTCCAATGGTGAGACTTCAAGTGTAGAGTCTCTACATTTTGATTTGGATACCATCAAATCAGCCACAAACGACCTCTCCCCCGACAATAAACTAGGCCAAGGTGGGTATGGCGAGGTGTACAAGGGCATTTTACCTGGTGGACAGGAGTTAGCTGTGAAGAGATTATCAAGTAGTTCCAAACAAGGTGTACTAGAATTTAAGAATGAAGTAGTTACAATGGCAAAACTACACCATAGAAATCTTGTAACGTTTCTTGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACTGGAAAACAAAACTAAATTGAATTGGTCAAATCGATACAAGATTATTGAAGGCATTGCAAGGGGAATACTTTATCTTCATGAAGATTCTCAATTGAAAATCATACATCATGATCTCAAATCTAGCAATATATTGTTGGATGAAGGTCTAAATCCAAAAATATCTGATTTTGGTATGGCTAGAATTTTTGGAACTGATCAAACTCAAGCCAGCACTAGTAAAGTTGTTGGCACATTTGGCTATATCGCTCCTGAATATGCAATGCATGGTCATATTTCAGTGAAATCTGATATATACAGTTTTGGTGTCCTAATCCTGGAGATCATCAGTGGCAAGAAGAATACATCTTTCCATGCAACAAATTATGCTGAAAACTTGCCAACCTATGCCTGGAAACTCTGGAGGGAAGGGACACCATTAGAATTGCTGGATCCTAGTGTAAGACAATCTTGTTCAAGCAATGAAGTTATTAAATGCATCCATATAAGCTTTTTGTGTATCCAAGAAAATCCAGCTCTAAGACCTGATACACAATTTATTATGGTGATGCTAAATAGTCATTCCGTCACCCTGCCAGATCCTCAGGAGCCAGCATTTTTGTTTGATCGCCGCCATAGAACAGATTCAAACAACAGTCTAGCAATTTCCGAGGATAGCTCGGATCAATCTAAAAATAAGTCTATGCAACCATCTGTGGATGAAGATCCAATTTCTGACATGCATCCTCTATTATGTCCCAAGCGTGAAACCGCACATTTCATCACCAGAAAATTGATGATTCACTTCATGGATTCTCTTAAGGCCTTCCTGCTCCTTGCTCTTCTAGTCTTCTTCTTCATTGCTAGAATGAAAGCACAGACGCCACAGGTGGATTGTTCAGGCCCTACTTATGCCCCTAACAGCACATATCACTCAAATCTCAATCGCTTACTCTCAAATCTTTCCTCAAACGCCAGTCGTAGCGATGGCTTTTACAACACCACCGTCGGACAAAATGGCGACGCTGTCTACGGCCTCTACCTCTGCCGCGGAGACACCGCCGTCTCCGCCTGTCAAGCATGTGTTTCCCAGGCAACCAAAGATATCAGGCAATGCCTCAATTATACACGAGCCGTGGGTTGGTACGAAAAGTGCACGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGACCCCACTCGCGTCCTCTACAACAACGGCAATGCAGCAGACCCCAAAAGCTTCATGCAACTGGTGATTGATACCATGAATGTGGTGGCGAAAGAAGCGGCGTACGGCGGCAGCGGGAGCAAGAAATATGCGACGAGAGAACAAAACTACAGTTCTTTTCAAACTCTGTATACTATGGCGCAGTGCACGCCGGATATATCTAGAGATGACTGTTATAACTGTTTGAGAAGAACAATCGGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCCATAGCTCGCGCCTACAGTTGCAACGTAAGGTATGAATTGTACCCCTTTTATGGAGTGACTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCGCTTCCAATGATAAAAGCAAGATTTCGGCAGTGGCAATTATTGCCATAGTGGTTCAGTCGGCGATATTCATATTGCAAGTCTCGCTCTGCTTCTTGTGCCTTAGATGGTGGAGAGCCAGGAAGAATGCTTCACTTCCTAAAACTGCTGAGATTTCAGAGTCACTACATTTTGATTTGGATAGCATCAAAACAGCAACAAACGACTTCTGCCCCGACAATAAACTTGGTCAAGGAGGATATGGGGAGGTGTACAAGGGCATTTTACCAGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAATAGTTCCAAACAAGGTGTACTAGAATTTAAGAATGAAGTAGTTACCATGGCAAAGCTTCAACATAGAAATCTCGTCAGGTTTCTCGGATTTTGTTTAGAAGAGGAAGAAAAGATACTCGTTTATGAATATTTGTCCAACAAAAGCTTGGATAATTTTTTGTTTGAGGCAGAAAACAAAGGTAAATTGAATTGGTCAAATCGATACAATATTATTGAAGGGATTGCGAGGGGGATAAGTTATCTTCATGAAGATTCTCAACTCAAAATTATACACCGCGATCTCAAATCTAGTAATGTATTGTTGGATGAAGATTTGAATCCAAAAATATCTGATTTTGGAATGGCTAGAATTTTCCAAGCTGATCAAACCCATGCCGACACAAGTAAAGTTGTTGGTACATTCGGTTACATTGCTCCTGAATATGCAATGCATGGTCATATTTCAGTCAAATCTGATATATATAGTTTTGGCATCCTAATCCTGGAGATCATCAGCGGCAAGAAGAATACATCTTTCTATGCGTCAAATTATGCTGAAAACCTCGCAACCTATGCCTGGAAACTCTGGAGGGAAGGAGCACCATTGGAATTGCTGGATCCTAGTCTAAGAAATTCATGTCCAGGAAATGAAGTTATTAAATGCATTCATATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTCTGAGACCAACGATACAATTTATTATGGTGATGCTAGGTAGTCACTCCGTCACCCTGCCAGATCCTCAGCAGCCAGCTTTTTTGTTTAATTGCCATAGAACAGATTCAAACAATCAGGCAAGCTTTGAGAACAGCTCGGATCAATCTACAGGCAGGTCTATGCAAAGATCTGTGGATGAAGATCCAATTTCTGACATACATGTCACGTCGTCTTCAGGTCCCTGTCATATCCTCAATTTGCTGACACTTTGCATGTGGGGTATATTTACTGTTTGTGATATTTTTGAAAGTTTTGGAATTTGA 3825 0.4272 MDSTKAFLLLALLICFIARIKAQEPQVDCSGLTYAPNSTYHSNLNRLLSTLSSNANSIGGFYNTTVGKNDDAVYGLYLCRGDTTVSACQACVSRATKDIRQCLNSTQAVGWYDKCMLRYSDADFFSIEQDDPTLVLHNSGNASDPKSFMQLCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAFSCNVRYELYPFYGVISSLPSPRVPESAFTSNGETSSVESLHFDLDTIKSATNDLSPDNKLGQGGYGEVYKGILPGGQELAVKRLSSSSKQGVLEFKNEVVTMAKLHHRNLVTFLGFCLDEEEKILIYEFLPNKSLDNFLFGLENKTKLNWSNRYKIIEGIARGILYLHEDSQLKIIHHDLKSSNILLDEGLNPKISDFGMARIFGTDQTQASTSKVVGTFGYIAPEYAMHGHISVKSDIYSFGVLILEIISGKKNTSFHATNYAENLPTYAWKLWREGTPLELLDPSVRQSCSSNEVIKCIHISFLCIQENPALRPDTQFIMVMLNSHSVTLPDPQEPAFLFDRRHRTDSNNSLAISEDSSDQSKNKSMQPSVDEDPISDMHPLLCPKRETAHFITRKLMIHFMDSLKAFLLLALLVFFFIARMKAQTPQVDCSGPTYAPNSTYHSNLNRLLSNLSSNASRSDGFYNTTVGQNGDAVYGLYLCRGDTAVSACQACVSQATKDIRQCLNYTRAVGWYEKCTLRYSDADFFSIEQDDPTRVLYNNGNAADPKSFMQLVIDTMNVVAKEAAYGGSGSKKYATREQNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIGEYPNCCFGRLGAIARAYSCNVRYELYPFYGVTSSLPSPRVPESAFASNDKSKISAVAIIAIVVQSAIFILQVSLCFLCLRWWRARKNASLPKTAEISESLHFDLDSIKTATNDFCPDNKLGQGGYGEVYKGILPGGQELAVKRLSNSSKQGVLEFKNEVVTMAKLQHRNLVRFLGFCLEEEEKILVYEYLSNKSLDNFLFEAENKGKLNWSNRYNIIEGIARGISYLHEDSQLKIIHRDLKSSNVLLDEDLNPKISDFGMARIFQADQTHADTSKVVGTFGYIAPEYAMHGHISVKSDIYSFGILILEIISGKKNTSFYASNYAENLATYAWKLWREGAPLELLDPSLRNSCPGNEVIKCIHISLLCIQENPALRPTIQFIMVMLGSHSVTLPDPQQPAFLFNCHRTDSNNQASFENSSDQSTGRSMQRSVDEDPISDIHVTSSSGPCHILNLLTLCMWGIFTVCDIFESFGI 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00028 1274 ProSiteProfiles Gnk2-homologous domain profile. 613 715 IPR002902 -
Pral1787g00028 1274 CDD STKc_IRAK 247 504 - -
Pral1787g00028 1274 ProSiteProfiles Protein kinase domain profile. 915 1192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00028 1274 ProSitePatterns Protein kinases ATP-binding region signature. 247 269 IPR017441 GO:0005524
Pral1787g00028 1274 Gene3D - 723 829 IPR038408 -
Pral1787g00028 1274 Gene3D - 135 198 IPR038408 -
Pral1787g00028 1274 Gene3D - 24 124 IPR038408 -
Pral1787g00028 1274 Gene3D - 613 715 IPR038408 -
Pral1787g00028 1274 FunFam Cysteine-rich receptor-like protein kinase 25 723 829 - -
Pral1787g00028 1274 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 621 1227 - -
Pral1787g00028 1274 MobiDBLite consensus disorder prediction 539 568 - -
Pral1787g00028 1274 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Pral1787g00028 1274 MobiDBLite consensus disorder prediction 1213 1231 - -
Pral1787g00028 1274 SUPERFAMILY Protein kinase-like (PK-like) 224 543 IPR011009 -
Pral1787g00028 1274 MobiDBLite consensus disorder prediction 1213 1233 - -
Pral1787g00028 1274 FunFam Cysteine-rich receptor-like protein kinase 10 883 990 - -
Pral1787g00028 1274 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 613 715 - -
Pral1787g00028 1274 ProSiteProfiles Protein kinase domain profile. 241 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00028 1274 FunFam Cysteine-rich receptor-like protein kinase 10 208 316 - -
Pral1787g00028 1274 FunFam cysteine-rich receptor-like protein kinase 10 991 1193 - -
Pral1787g00028 1274 Gene3D Transferase(Phosphotransferase) domain 1 991 1194 - -
Pral1787g00028 1274 Gene3D Transferase(Phosphotransferase) domain 1 317 521 - -
Pral1787g00028 1274 Pfam Protein tyrosine and serine/threonine kinase 244 508 IPR001245 GO:0004672|GO:0006468
Pral1787g00028 1274 Pfam Protein tyrosine and serine/threonine kinase 919 1184 IPR001245 GO:0004672|GO:0006468
Pral1787g00028 1274 SUPERFAMILY Protein kinase-like (PK-like) 899 1208 IPR011009 -
Pral1787g00028 1274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1036 1048 IPR008271 GO:0004672|GO:0006468
Pral1787g00028 1274 ProSiteProfiles Gnk2-homologous domain profile. 721 829 IPR002902 -
Pral1787g00028 1274 SMART serkin_6 915 1192 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00028 1274 SMART serkin_6 241 518 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00028 1274 Pfam Salt stress response/antifungal 148 196 IPR002902 -
Pral1787g00028 1274 Pfam Salt stress response/antifungal 620 712 IPR002902 -
Pral1787g00028 1274 Pfam Salt stress response/antifungal 29 121 IPR002902 -
Pral1787g00028 1274 Pfam Salt stress response/antifungal 733 827 IPR002902 -
Pral1787g00028 1274 ProSitePatterns Protein kinases ATP-binding region signature. 921 943 IPR017441 GO:0005524
Pral1787g00028 1274 FunFam cysteine-rich receptor-like protein kinase 10 317 519 - -
Pral1787g00028 1274 Gene3D Phosphorylase Kinase; domain 1 209 316 - -
Pral1787g00028 1274 Gene3D Phosphorylase Kinase; domain 1 881 990 - -
Pral1787g00028 1274 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 22 124 - -
Pral1787g00028 1274 CDD STKc_IRAK 921 1179 - -
Pral1787g00028 1274 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Pral1787g00028 1274 MobiDBLite consensus disorder prediction 540 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00028 Pral-Chr1787 372487 384473 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00028 33 570 Receptor kinase-like Gene Family AT4G05200 43.417 9.37e-162 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00028 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00028 - - pavi:110754814 1134.4