Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00027 ATGAATTCTCCTCAACTCTTTCTTCTTCTTTGTCTTGTAATCATTTCGATTGCCAGAATAAAAGGACAATACACTTGTTCCCCTACAACTTATGCACAGAAAAGCACGTTTCAGACAAATGTGAATCACTTACTTTCTTCCCTTTCCTCCAACTCCAATCAAAGTGATGGATTTTACAACACCACCGTCACCGGGCAAGAGAACAACCCCAACACCACCGCCTACGGCATGTTCCAGTGCCTCGGCTATGTCACCGTCCAGACCTGTCAAAAATGTGTTTCTGACGGAAGCAAATATATCCTTCAGCAATGTCCCAACAATACTGGAGCCACTGGTTGGTACCGCAATCAGTGCTGGTTACGTTACTCCAACCAGTATTTCTTCTCCCAAACGGAAGAATACCCCAGGTTAGTTTATTATAACGTCAACAATGCAACAGACACGACCAGATTTATGAACCTGGTGGGTGAAACCTTGAGGGGGATTGCTAAAGAGGCATCGGAAGGCGGAAGCAAGAAATTTAAGACAAAAACAGTAGACTATGATGCTTTTCAAACTCTGTATACTATGGCGCAGTGCACACCGGATGTATCTGAGATCGATTGTCTCATGTGTCTCAGCAATAGTATTAGCAATTTGCCTATTTGCTGTAATGGAAAAGTGGGCGGAGTAACACTCACGCCCAGTTGCTATTTAAGGTATGAAACGTACCCCTTTTACCCGGAACCGGCCCCACCACCTGCGCTTCCGCCACCAGCTCCTTCGCCGGGATCCACTTCCAAAGAAAAAAGAAGGATTTCAGCTGGGATAATTATTGCCATAGCTGTTCCAACGGTGACATTCATATTGCTCTGCTTCTTGTGCTTAAAAAGGAGGGCAAGGAAATATGCTTCAGTTCCTAAACAAAGTGTTGACATTTCAAGCGTAGAATCCCTGCAATTTGATTTGGATACCATCAGAACAGCCACAAATGACTTCTCTCCTGACAATAAACTTGGTCAAGGAGGATTTGGTGAGGTTTACAAGGGTGTTCTACCTAGTGGACAAGAGTTAGCCGTAAAAAGACTATCAAGCGGTTCAAAACAAGGTGTGGGAGAATTTAAGAATGAAGTTGTTACGATGGCAAAACTTCAACATAGAAATCTCGTAAGGTTACTTGGATTTTGCTTGGATGAAGAAGAAAAGATACTCATATACGAATTTTTGCCCAACAGAAGTTTGGATAATTTTTTGTTCGGACTTGAAAACCAAGGTAAATTGAATTGGTCAACGCGTTACAAGATCATTGAAGGCATTACAAGAGGGATGCTTTATCTTCATGAAGATTCTCGACTAAAAATCATACATCGTGATCTCAAAGCTAGTAATGTATTGTTGGATAAGGATTTGAATCCAAAAATCTCTGATTTTGGTATGGCTAAAATTTTTGGAGTTGATCAAACGCAAGCAAGCACAAGTAGAGTTGTCGGCACCTTTGGATACATGGCTCCAGAGTATGCAATGCATGGTCATATTTCAATCAAATCTGATATATATAGTTTTGGTGTCCTCATTTTGGAGATTATTAGCGGCAAGAAGAATACATCTTTCTATATTTCAAGCTATGCTGAAGACCTACTAAGCTATGCCTGGAGGCTGTGGAGGGAAGGGAGGCCATTGGAATTGCTGGATCCTAGTTTAAGAGATTCTTGTTCAAAAAATGAAGTTATTAAATGCATCCATATGAGTTTGTTATGTATTCAGGAAAACCCAGCTCTGAGACCTACAATACAGTCTATTATGGTGATGCTAAGCAGTCACTCCGTCACATTGTCGGATCCTCAGGAGCCAGCCTTCTTTGTTGGTCGCCATAGATCAGATTCAAACAATCCAGCCATTTATGAAAATAGTTCAGATCAATCTACCAGCAAGTCTGCGCAGTGGTCTGTGGATAAAGATCCGATTACTGATTTCTACCCTCGCTAG 1965 0.4163 MNSPQLFLLLCLVIISIARIKGQYTCSPTTYAQKSTFQTNVNHLLSSLSSNSNQSDGFYNTTVTGQENNPNTTAYGMFQCLGYVTVQTCQKCVSDGSKYILQQCPNNTGATGWYRNQCWLRYSNQYFFSQTEEYPRLVYYNVNNATDTTRFMNLVGETLRGIAKEASEGGSKKFKTKTVDYDAFQTLYTMAQCTPDVSEIDCLMCLSNSISNLPICCNGKVGGVTLTPSCYLRYETYPFYPEPAPPPALPPPAPSPGSTSKEKRRISAGIIIAIAVPTVTFILLCFLCLKRRARKYASVPKQSVDISSVESLQFDLDTIRTATNDFSPDNKLGQGGFGEVYKGVLPSGQELAVKRLSSGSKQGVGEFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPNRSLDNFLFGLENQGKLNWSTRYKIIEGITRGMLYLHEDSRLKIIHRDLKASNVLLDKDLNPKISDFGMAKIFGVDQTQASTSRVVGTFGYMAPEYAMHGHISIKSDIYSFGVLILEIISGKKNTSFYISSYAEDLLSYAWRLWREGRPLELLDPSLRDSCSKNEVIKCIHMSLLCIQENPALRPTIQSIMVMLSSHSVTLSDPQEPAFFVGRHRSDSNNPAIYENSSDQSTSKSAQWSVDKDPITDFYPR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00027 654 ProSiteProfiles Gnk2-homologous domain profile. 133 239 IPR002902 -
Pral1787g00027 654 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Pral1787g00027 654 Gene3D - 21 127 IPR038408 -
Pral1787g00027 654 Gene3D - 136 239 IPR038408 -
Pral1787g00027 654 FunFam cysteine-rich receptor-like protein kinase 10 402 604 - -
Pral1787g00027 654 SMART serkin_6 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00027 654 Pfam Salt stress response/antifungal 143 237 IPR002902 -
Pral1787g00027 654 Pfam Salt stress response/antifungal 26 125 IPR002902 -
Pral1787g00027 654 CDD STKc_IRAK 332 597 - -
Pral1787g00027 654 Gene3D Phosphorylase Kinase; domain 1 289 401 - -
Pral1787g00027 654 ProSiteProfiles Gnk2-homologous domain profile. 19 127 IPR002902 -
Pral1787g00027 654 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 640 - -
Pral1787g00027 654 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00027 654 SUPERFAMILY Protein kinase-like (PK-like) 311 619 IPR011009 -
Pral1787g00027 654 FunFam Cysteine-rich receptor-like protein kinase 10 290 401 - -
Pral1787g00027 654 Pfam Protein tyrosine and serine/threonine kinase 329 595 IPR001245 GO:0004672|GO:0006468
Pral1787g00027 654 Gene3D Transferase(Phosphotransferase) domain 1 402 609 - -
Pral1787g00027 654 FunFam Cysteine-rich receptor-like protein kinase 10 135 239 - -
Pral1787g00027 654 MobiDBLite consensus disorder prediction 622 643 - -
Pral1787g00027 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pral1787g00027 654 MobiDBLite consensus disorder prediction 616 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00027 Pral-Chr1787 357980 361751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00027 6 654 Receptor kinase-like Gene Family AT4G05200 48.132 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00027 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00027 - - csin:114306417 684.485