Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00026 ATGTTCGTCATTAACATGCCTTCCCACAAAATTATGTTACTCTTTTTCTTTATTAGCTTTCTCCATTCTGCTACTACTCAAGCACAACCCGTCTATACTAACAGCAGCTGTTCTGGCGGCGCCTTCGCTGCCAATAGTTCCTTCCAATCCGACCTCACCAACCTGCTCTCTTCCTTAGCTTCCAACAAAACCGCCAACAACGATTTCTACAACACCACCGTGCACCGCGGTCGCAACACCGTATACGGCCTCTTCATGTGCCGGGGTGACGTCACCCTCCAGTTGTGCCACCAGTGCGTCGTTGACGCAACCAACAACATACGTTCCCTGTGCAACGTCTCTAAGGAGGCCGTGATATGGTACGAGGAGTGTATGGTTCGCTATTCCGACCGCTACTTCTTTTCCTCCGTCAACACGCGTCCTAGTCAGTGCGGGGCCAACACCAACAACGTCGCCAACAACCAAACAGGATTCATTAATGTATTGAACGCAACAATGAACAAGGCTGCGGACGAGGCGGCGAAACCTGGTATGGGGAAGAATTTTGCGACAGAAGAAGCGAGTTTACAGTTTCAAACTTTGTATTGTCTGGTTCAGTGCACGCCGGACCTTTCTCCCCAAGGTTGCAGAACATGTCTGAGAGACGCGATTGGGGACCTTTTCAACTGTAGTGACAGGAAGATAGGAGGAAGAGTTCTATATCCCAGCTGTAACGTTCGTTATGAATTGTTCATCTTTTATAATTCTAGTGGTAAGCCAGCACCGCCGCCTCTTCCTGCACCTTTTCCGGCAACTCATATAGGAAAAACGAGGAACATTGTAATAGCTGTTGCTTCTGTTGCTTGTGCGGGGTTACTTTTTTGTTTGGTGTACTATTTCTTAAGGAGTTTAATAAGGAAGAGACGCAGGGCTGAACTCAGACAAAAATACTTTGGAGAAGAAAGCAACACTTTAGAGCCTCTGCAATTTAGTTTGGCTACTATTGAAGCTGCAACAAATAGGTTTTCAGAGGAAAATTGTCTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTATTCTTTCAAATGGTCAAGAAATAGCTGTAAAGAGACTTTCAAAAGGTTCAGGCCAAGGTGCAGCAGAATTTAAAAATGAAGTATTATTAATAGCCAGACTGCAGCACAGAAATTTGGTGACCTTACTGGGATTTTGCGTAGAAGATCAAGAGAAAATTCTCATTTATGAATATGTTCCCAATAAAAGCCTTGACTACTTCCTATTTGGTTCCCAGGAAAATAGAAGACTGACTTGGGAGGAACGTTACGAAATCATAAGAGGAGTTGCTCGTGGAATTTTATATCTTCATGAATATTCTCGTCTTAAAATTATACATCGTGATCTTAAACCTAGTAATATTTTGTTGGACAATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAGGATGGTTGCTATCAATGAAAATGAGGGAAATACACGGAGGATTGTCGGAACATATGGTTACATGCCTCCAGAATATGCGATGTTTGGGCTATATTCTGAAAAATCAGATGTTTTTAGCTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAAGAATGCAAGTTGTCATGATGAATCGCAGTATGCTGATAGCCTCTTGAGCTATACGTGGAATCAATGGAGTAATGAAAAGTTGTTCGAGATGTTGGATTCAAATCTAAAAGAAATGGAATGTTATAATGAAGTAAGCCGGTGCATCCAAATTGGATTGTTATGTGTTCAAAGGCATCCAGATTCAAGACCTTCCATGGCTACAATTGTTTCATATCTGGGCAATGATTCAATTCAATTGCCACATCCACAGCAACCTGCTTTCTTTTTGCGTGCTCGAAGGGTAATCACTTCTGCAAGTAGAGAATATAGCTCGATTAATGAAATGTCTATGAGTGATTTCTTTCCTCGCTAG 1956 0.4218 MFVINMPSHKIMLLFFFISFLHSATTQAQPVYTNSSCSGGAFAANSSFQSDLTNLLSSLASNKTANNDFYNTTVHRGRNTVYGLFMCRGDVTLQLCHQCVVDATNNIRSLCNVSKEAVIWYEECMVRYSDRYFFSSVNTRPSQCGANTNNVANNQTGFINVLNATMNKAADEAAKPGMGKNFATEEASLQFQTLYCLVQCTPDLSPQGCRTCLRDAIGDLFNCSDRKIGGRVLYPSCNVRYELFIFYNSSGKPAPPPLPAPFPATHIGKTRNIVIAVASVACAGLLFCLVYYFLRSLIRKRRRAELRQKYFGEESNTLEPLQFSLATIEAATNRFSEENCLGQGGFGQVYKGILSNGQEIAVKRLSKGSGQGAAEFKNEVLLIARLQHRNLVTLLGFCVEDQEKILIYEYVPNKSLDYFLFGSQENRRLTWEERYEIIRGVARGILYLHEYSRLKIIHRDLKPSNILLDNEMNPKISDFGLARMVAINENEGNTRRIVGTYGYMPPEYAMFGLYSEKSDVFSFGVIVLEIISGKKNASCHDESQYADSLLSYTWNQWSNEKLFEMLDSNLKEMECYNEVSRCIQIGLLCVQRHPDSRPSMATIVSYLGNDSIQLPHPQQPAFFLRARRVITSASREYSSINEMSMSDFFPR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00026 651 SUPERFAMILY Protein kinase-like (PK-like) 318 641 IPR011009 -
Pral1787g00026 651 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 24 645 - -
Pral1787g00026 651 CDD STKc_IRAK 341 607 - -
Pral1787g00026 651 FunFam Cysteine-rich receptor-like protein kinase 25 141 246 - -
Pral1787g00026 651 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Pral1787g00026 651 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 30 132 - -
Pral1787g00026 651 SMART serkin_6 335 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00026 651 Gene3D Transferase(Phosphotransferase) domain 1 411 615 - -
Pral1787g00026 651 FunFam cysteine-rich receptor-like protein kinase 10 411 614 - -
Pral1787g00026 651 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Pral1787g00026 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Pral1787g00026 651 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 299 410 - -
Pral1787g00026 651 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Pral1787g00026 651 ProSiteProfiles Protein kinase domain profile. 335 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00026 651 Gene3D Phosphorylase Kinase; domain 1 296 410 - -
Pral1787g00026 651 Gene3D - 139 246 IPR038408 -
Pral1787g00026 651 Gene3D - 29 133 IPR038408 -
Pral1787g00026 651 Pfam Salt stress response/antifungal 37 130 IPR002902 -
Pral1787g00026 651 Pfam Salt stress response/antifungal 144 242 IPR002902 -
Pral1787g00026 651 Pfam Protein tyrosine and serine/threonine kinase 338 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00026 Pral-Chr1787 320049 323115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00026 14 628 Receptor kinase-like Gene Family AT4G05200 46.082 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00026 PK_Tyr_Ser-Thr 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00026 - - pcin:129286093 1021.92