Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00025 ATGCTTCGCTATTCCAATCGCTTTTTCTTCTCTACCCTGGACACACTGCCTGTATATACAAAACCCGGTGGGGATATGCTTGAAAACGAAACAAAGACCTTCAATCGGCTGTTAGGGAATACATTGAATGATCTAGTGGCGGCAACGACGAACTCATCAGAGAGTGTAGGAGTGAAAAATTTTGAGACAAACACAAAATCCAGCGATTTAGAGTTGAAAACGTTGTATACTCTTGCACAATGTACTCCAAACCTGTCCAGCCAAGACTGCAGAAAATGTCTACAAGGTGCTTTGCAAAATATCATGTCATGTTGTTCTGCAAAGAAAGGAGGACAGGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACATATTTTATAATGACAGTAAAAATGTTGTTTCGGTGCCACCTGCGTATCCCCCAGATGAGACAGGTCCCCCAGGAAATCCAGGAGAAGATAACGACCACTCACGAACAATTATAATAGCGGTGGTGTCTGTCACTATTGGCTCAATCATGCTCCTTTGTTTCGGCTACTATTACTGGCAGAGAAAAAGGAGCAAGAGCTATAAGGAGATTCTGAAGAAAAACTTTGGAAGTGAAGGAGCCATGTTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCAACTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTTCGAGGGCATTCTTCCCGATGGCAGCAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTATTAGAATTCAAGAATGAGGTTCTATTAATTGCCAAACTTCAACATAGAAACCTGGTGGCACTATTAGGATTTTGCCTGAAAGACGAAGAAAAAATACTTGTTTATGAATATGTTCCCAACATGAGTCTGGATTACTTTTTATTTGGTTCACAAAAGCCAAGAATGTTAAATTGGCTTGAGCGCCACAAAATTATAGGAGGCATTGCTGGAGGAATTCTTTATCTCCATGAACATTCACGCCTTAAAGTAATACATCGAGATCTCAAACCTAGCAATATATTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTCGGCTTGGCAAGAATGGTTGGCATTAATGAAACCAGGGGGAACACAAATAGAATTGTTGGAACATTGGGTTATATGTCTCCAGAATATATTAAATTTGGACTATTTTCTGAGAAATCAGATGTTTTCAGCTTTGGGGTGATGGTTTTAGAAATTATTAGTGGAAAGAAGAATATAAATTCTCATCGTGAATATCCTGAATCTCAATATGCTGATGGACTATTGAGTAATGCTTGGAAGCATTGGAGGGACGAAAAATTGATAGCGATGGTGGATCCAAATCTGACAGAAGTTGAGTCACACAGTGAAATAATCAAATGCATCCATGTCGGCTTGTTGTGTGTTCAAGGAAATCCAGAAGTTAGGCCTTCCATGAATGAAGTTGTTCAATATCTAAGTAATGATTCAATTGAATTACCAATTCCTCAAGAACCAGCATTCTTCATACATAGTCAAATGGAACCAGTAGCAACCACCAGAGAAATGGAGGGTCAGCTTGCCAACCACAATCAATATTCCATCAGTGAAATGTCGAATAGTACACTATTTCCTCGTTAG 1659 0.3906 MLRYSNRFFFSTLDTLPVYTKPGGDMLENETKTFNRLLGNTLNDLVAATTNSSESVGVKNFETNTKSSDLELKTLYTLAQCTPNLSSQDCRKCLQGALQNIMSCCSAKKGGQVMNPSCNLRFESYIFYNDSKNVVSVPPAYPPDETGPPGNPGEDNDHSRTIIIAVVSVTIGSIMLLCFGYYYWQRKRSKSYKEILKKNFGSEGAMLESLQFNLATIEAATDKFSTENRIGKGGFGEVFEGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDEEKILVYEYVPNMSLDYFLFGSQKPRMLNWLERHKIIGGIAGGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGLARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVFSFGVMVLEIISGKKNINSHREYPESQYADGLLSNAWKHWRDEKLIAMVDPNLTEVESHSEIIKCIHVGLLCVQGNPEVRPSMNEVVQYLSNDSIELPIPQEPAFFIHSQMEPVATTREMEGQLANHNQYSISEMSNSTLFPR 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00025 552 ProSitePatterns Protein kinases ATP-binding region signature. 230 252 IPR017441 GO:0005524
Pral1787g00025 552 SUPERFAMILY Protein kinase-like (PK-like) 209 525 IPR011009 -
Pral1787g00025 552 FunFam cysteine-rich receptor-like protein kinase 10 300 506 - -
Pral1787g00025 552 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 185 299 - -
Pral1787g00025 552 Gene3D - 25 127 IPR038408 -
Pral1787g00025 552 Gene3D Transferase(Phosphotransferase) domain 1 300 506 - -
Pral1787g00025 552 ProSiteProfiles Protein kinase domain profile. 224 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00025 552 Pfam Protein tyrosine and serine/threonine kinase 226 499 IPR001245 GO:0004672|GO:0006468
Pral1787g00025 552 ProSiteProfiles Gnk2-homologous domain profile. 15 127 IPR002902 -
Pral1787g00025 552 CDD STKc_IRAK 230 499 - -
Pral1787g00025 552 Gene3D Phosphorylase Kinase; domain 1 185 299 - -
Pral1787g00025 552 Pfam Salt stress response/antifungal 30 125 IPR002902 -
Pral1787g00025 552 MobiDBLite consensus disorder prediction 138 157 - -
Pral1787g00025 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 345 357 IPR008271 GO:0004672|GO:0006468
Pral1787g00025 552 SMART serkin_6 224 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00025 552 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 67 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00025 Pral-Chr1787 298838 301585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00025 2 519 Receptor kinase-like Gene Family AT4G23190 45.849 1.91e-153 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00025 PK_Tyr_Ser-Thr 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00025 - - pcin:129286968 701.049