Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00020 ATGGATTCTATTAAGGCGTTCCTGCTCCTTGCTCTTCTAATCTTTTTCATTGCTAGAATCAATGCACAGGAACCAGAGGTGGATTGTTCAGGCCCTACTTGTGCCCCAAACAGCACATATCACTCAAATCTCAATCGCCTGCTTTCAACTCTTTTCTCCAACGCCAATAGCATTGGTAGCTTTTACAACACCACCGTCGGACAAAACGACGACGCCGTTCACAGTCTCTACCTCTGCCGCCGAGACACCACCGTCTCCGCCTGTCAAGCATGTGTTTCCCGGGCAACCAAAGATATCAAGCAATGCCTCAATTATACCCAAGCCCTGGGTTGGTACGACAAGTGCATGTTACGATACTCCGACGCCGATTTCTTCTCCATAGAGCAAGATGATCCCACTCGCGTCCTCTTCAACAACGGCAACGCAACAGATCCCAAAAGCTTTATGCAACTGGTGATCGATACCATGAATGCGGTGGCCAGAGAAGCGGCGTACCGCGGCGGCGGGGGTAGCAAGAAATTTGCGACGAAAGAAAAAAACTACAGTTCTTTTCAAACTCTGTACACTATGGCGCAGTGCACACCGGATATATCTAGAGATGACTGTTATAACTGTCTGAGAAGAACAATCCGAGAGTATCCGAATTGCTGTTTTGGGAGGTTAGGGGCAATCGCACGCGCCTTCAGTTGCAACGTAAGGTACGAATTGTACCCCTTTTATGGAGTGATTTCGTCGCTTCCTTCCCCTCGTGTGCCAGAGTCAGCCTTCACTTCCAATGATAACGGCAAGCTTTCGGCTAGGACAATTATCGCCATAGTAGTTCAAACAGCGATAGTCATATTGCAAGCCTCGTTCTGCTTCTTGTGCCTTCGGTGGCGGAGAGCAAGTAAGAATGCTTCAGTTCCTAAAACAGGTGAGACTTCAAGTGTAGAGTCTCTAAAGTTTGATTTGGATACCATCAAATCAGCCACAGACGACTTCTCCCCCGACAATAAACTAGGCCAAGGTGGGTATGGCGAGGTGTACAAGGGCATTTTACCCGGTGGACAAGAGTTAGCTGTGAAGAGATTATCAAGTAGTTCCAAACAAGGTGTACTAGAATTTAAGCATGAAGTAGTTACAATGGCAAAACTACACCATAGAAATCTTGTGAGGTTTCTCGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATATGAATTTTTGCCCAACAAAAGCTTGGATAATTTTTTGTTTGGACTTGAAAACAAAACTAAATTGAATTGGTCAAATCAATACAAGATTATTGAAGGCATTGCAAGGGGAATACTTTATCTTCACGAAGATTCTCAATTGAAAATTATACATCGTGATCTCAAATTTAGCAATATATTGTTGGATGAGGATTTGAATCCAAAAATATCTGATTTCGGTATGGCTCAAATTTTTGGAACTAATCAAACTCAAGCCAGCACAAGTAAAGTTGTCGGCACATTTGGCTACATTGCTCCTGAATACGCAATGCATGGTCATATTTCAGTCAAATGTGATATATATAGTTTTGGCATCCTAATTCTGGAGATCATTAGTGGCAAGAAGAATACATCTTTCCATGCATCAAATTATGCTGAAAACTTGCCAACCTATGCCTGGAAACTCTGGAGGGAAGGATCACCATTGGAATTGCTGGATCCTAGTCTAAGAAATTCCTGTCCGGGAAATGTAGTTATTAAATGCATTCATATAAGCTTGTTGTGTATCCAGGAAAATCCAGCTCTTCAACCAACGATACAGTTTATTATGGTGATGCTAGGTAGTCACTCCGTCACCCTGCCAGATCCTCAGCAGCCAGCTTTTTTGTTTAGTCGCCATAGAACAGATTCAAACAATGAGGCAAGTTTTGAGAACAGCTCGGATCAATCTACAAGCACGTCTATGCAACGATCTGTGGATGAAGATCCAATTTCTGACATACATGTCACGTCGTCTTCAGGTCCCTGTCATATCCTCAATTTGCTGACACTTTGCATGTGGGATAAAAGCAAGGTTTCGGCTGCGACAATTATTGCCATAGCATTTCAAACAGCGATACTCATGATCCATGTCTCGCTCCATGCTTCCTGTGCCTTAGATATGGATGAAGAGCAGGCAAGAATGTTTCAGTTCCTAAGACTGTTTTGGCGTCCTGATTTTAGAGATCATTGTATCAGCAGCAAGAAGAATACATCATTCTATGGATCAAGTTCTGCAGGCCTGGAAGCTCCGGAGGGAAGGGAAGCCATTCGAATTGCTGGATCCTAG 2283 0.4345 MDSIKAFLLLALLIFFIARINAQEPEVDCSGPTCAPNSTYHSNLNRLLSTLFSNANSIGSFYNTTVGQNDDAVHSLYLCRRDTTVSACQACVSRATKDIKQCLNYTQALGWYDKCMLRYSDADFFSIEQDDPTRVLFNNGNATDPKSFMQLVIDTMNAVAREAAYRGGGGSKKFATKEKNYSSFQTLYTMAQCTPDISRDDCYNCLRRTIREYPNCCFGRLGAIARAFSCNVRYELYPFYGVISSLPSPRVPESAFTSNDNGKLSARTIIAIVVQTAIVILQASFCFLCLRWRRASKNASVPKTGETSSVESLKFDLDTIKSATDDFSPDNKLGQGGYGEVYKGILPGGQELAVKRLSSSSKQGVLEFKHEVVTMAKLHHRNLVRFLGFCLDEEEKILIYEFLPNKSLDNFLFGLENKTKLNWSNQYKIIEGIARGILYLHEDSQLKIIHRDLKFSNILLDEDLNPKISDFGMAQIFGTNQTQASTSKVVGTFGYIAPEYAMHGHISVKCDIYSFGILILEIISGKKNTSFHASNYAENLPTYAWKLWREGSPLELLDPSLRNSCPGNVVIKCIHISLLCIQENPALQPTIQFIMVMLGSHSVTLPDPQQPAFLFSRHRTDSNNEASFENSSDQSTSTSMQRSVDEDPISDIHVTSSSGPCHILNLLTLCMWDKSKVSAATIIAIAFQTAILMIHVSLHASCALDMDEEQARMFQFLRLFWRPDFRDHCISSKKNTSFYGSSSAGLEAPEGREAIRIAGS 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00020 760 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 640 - -
Pral1787g00020 760 ProSiteProfiles Protein kinase domain profile. 327 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00020 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral1787g00020 760 FunFam Cysteine-rich receptor-like protein kinase 10 291 402 - -
Pral1787g00020 760 FunFam Cysteine-rich receptor-like protein kinase 25 132 239 - -
Pral1787g00020 760 ProSiteProfiles Gnk2-homologous domain profile. 22 124 IPR002902 -
Pral1787g00020 760 ProSiteProfiles Gnk2-homologous domain profile. 130 239 IPR002902 -
Pral1787g00020 760 SMART serkin_6 327 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00020 760 Pfam Protein tyrosine and serine/threonine kinase 330 595 IPR001245 GO:0004672|GO:0006468
Pral1787g00020 760 Gene3D Phosphorylase Kinase; domain 1 290 402 - -
Pral1787g00020 760 MobiDBLite consensus disorder prediction 623 645 - -
Pral1787g00020 760 Gene3D Transferase(Phosphotransferase) domain 1 403 607 - -
Pral1787g00020 760 SUPERFAMILY Protein kinase-like (PK-like) 311 623 IPR011009 -
Pral1787g00020 760 CDD STKc_IRAK 333 591 - -
Pral1787g00020 760 Gene3D - 132 239 IPR038408 -
Pral1787g00020 760 Gene3D - 25 124 IPR038408 -
Pral1787g00020 760 ProSitePatterns Protein kinases ATP-binding region signature. 333 355 IPR017441 GO:0005524
Pral1787g00020 760 Pfam Salt stress response/antifungal 33 121 IPR002902 -
Pral1787g00020 760 Pfam Salt stress response/antifungal 140 237 IPR002902 -
Pral1787g00020 760 FunFam cysteine-rich receptor-like protein kinase 10 403 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00020 Pral-Chr1787 238133 254784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00020 9 653 Receptor kinase-like Gene Family AT4G05200 44.461 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00020 Pkinase 9.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00020 - - tcc:108662469 640.573