Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00019 ATGATTCGTCTCATGAATTCTCCTAAGCTCTGTCTTCTTCTTTGCCTTGTAATCCTTTCGATTGCCAGAATCAAAGGACAGAATAACGTCTGTTCCCCTGATACTTATGCCCAGAAAAGCACGTTTCAGAAAAATTTGAACCACTTGCTTTCTTCCCTTTCCTCCAACACCAATCAAAGTGATGGATTTTACGGCACCACCGTCTCCAGTCAAGGAAACAACTCCGACGACACCGTCTGCGGATTGTTCCAGTGCCTCGGCTATGCCACCGTCCAGGCCTGTCAAAAATGTGTTTCCGAGGGAATCAAAGACATCCTCCGGAGATGCCCCAACAAAACAGGAGCCGTCGCGTGGTACGACAAGTGCTGGTTACATTACTCCGACCGCTGGTTAAATTACACCGACCAGTGTTTCCTCTCCAAATTGGAAGAAGAACCCAACGCGGTTGTTCTTAACAAACGCTATGCAACGGACACGGATAACTTTAAGAATCTGTTGGGAGAAACCTTGACAGCGGTTGCCAAAAAAGCGTCGGAAGGCGGAAGCAAAAAAAAATATGCGACGAAAGAAGCAAACATTAGTTCTTTTGAAACTCTGCACGCTATGGCGCAGTGCACGCCGGATATATCTGAGATTGATTGTCTCAGCTGTCTCAGTAACAGTATTAGCTATTTGCCTTATTGCTGTAATGGACTGGTCGGCGCAACAATCCTCAAGCCCAGTTGCTATTTAAGGTATGAAACGTACGCCTTTTACCCGGAAGCGCCTCCGCCGCCTGCTCCTTCGCCGGAATCCACTTCCAAAGGTCAGTTAAGCAGGATTTCAGCTGGGATAATTATTGCCATAGCTGTTCCAGCGGTGACATTCATATTGCTCTGCTTCTTGTGCTTAAAAAGGAGGGCAAGGAAAGATGCTTCAGTTCCTAAACAAAGTGTTGATATTTCAAGCGTAGAATCCCTGCAATTTGATTTGGATACCATCAGAACAGCCACAAATGACTTCTCTCCTGACAACAAACTTGGTCAAGGAGGATTTGGTGAGGTTTTCAAGGGTGTTCTACCTGGTGGACAAGAGTTAGCCGTAAAAAGACTATCAAGCGGTTCAAAACAAGGTGTGGGAGAATTTAAGAATGAAGTTGTTACGATGGCAAAACTTCAACATAGAAATCTCGTGAGGTTACTTGGATTTTGTTTGGATGAAGAAGAAAAGATACTCATATACGAATTTTTGCCCAACAGAAGCTTGGATAATTTTTTGTTCGGACTTGAAAACCAAGGTAAATTGAATTGGTCAACGCGTTACAAGATCATTGAAGGCATTACAAGAGGGATGCTTTATCTTCATGAAGATTCTCAACTAAAAATCATACATCGTGATCTCAAAGCTAGTAATGTATTATTGGATGAAGATTTGAATCCAAAAATCTCTGATTTTGGTATGGCTAAAATTTTTGAAGTTGATCAAACGCAAACAAGCACAAGCAAAGTTGTCGGAACCTTTGGATACATGGCTCCAGAGTATGCAATGCATGGTCATATTTCAATCAAATCTGATATATATAGTTTTGGTGTCCTAATTTTGGAGATTATTAGCGGCAAGAAGAATACATCTTTCTATATTTCAAGCTATGCTGACCACCTACTAAGCTATGCCTGGAGGCTGTGGAGGGAAGGGAGGCCATTGGAATTGGTGGATCCTAGTTTAAGAGATTCTTGTTCAAGAAATGAAGTTATTAAATGCATCAATGTGAGCTTGTTATGTATTCAGGAAAACCCAGCTCTGAGACCTACAATACAGTCTATTATGGTGATGCTAAGCAGTCACTCCGTCACATTGTCGGATCCTCGGGAGCCAGCCTTTTTTGTTGGTCGCCATACAACTGATTCAAACAATCCAGCCATTTATGAAAATAGTTCAGATCAATCTACCAGCAAGTCTGCGCAGTGGTCTGTAGATAAAGATCCAATTACTGATTTCGACCCTCGCTAG 1989 0.4253 MIRLMNSPKLCLLLCLVILSIARIKGQNNVCSPDTYAQKSTFQKNLNHLLSSLSSNTNQSDGFYGTTVSSQGNNSDDTVCGLFQCLGYATVQACQKCVSEGIKDILRRCPNKTGAVAWYDKCWLHYSDRWLNYTDQCFLSKLEEEPNAVVLNKRYATDTDNFKNLLGETLTAVAKKASEGGSKKKYATKEANISSFETLHAMAQCTPDISEIDCLSCLSNSISYLPYCCNGLVGATILKPSCYLRYETYAFYPEAPPPPAPSPESTSKGQLSRISAGIIIAIAVPAVTFILLCFLCLKRRARKDASVPKQSVDISSVESLQFDLDTIRTATNDFSPDNKLGQGGFGEVFKGVLPGGQELAVKRLSSGSKQGVGEFKNEVVTMAKLQHRNLVRLLGFCLDEEEKILIYEFLPNRSLDNFLFGLENQGKLNWSTRYKIIEGITRGMLYLHEDSQLKIIHRDLKASNVLLDEDLNPKISDFGMAKIFEVDQTQTSTSKVVGTFGYMAPEYAMHGHISIKSDIYSFGVLILEIISGKKNTSFYISSYADHLLSYAWRLWREGRPLELVDPSLRDSCSRNEVIKCINVSLLCIQENPALRPTIQSIMVMLSSHSVTLSDPREPAFFVGRHTTDSNNPAIYENSSDQSTSKSAQWSVDKDPITDFDPR 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00019 662 SMART serkin_6 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00019 662 ProSiteProfiles Gnk2-homologous domain profile. 144 251 IPR002902 -
Pral1787g00019 662 MobiDBLite consensus disorder prediction 630 651 - -
Pral1787g00019 662 Pfam Protein tyrosine and serine/threonine kinase 337 603 IPR001245 GO:0004672|GO:0006468
Pral1787g00019 662 Gene3D - 25 130 IPR038408 -
Pral1787g00019 662 Gene3D - 147 251 IPR038408 -
Pral1787g00019 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 455 467 IPR008271 GO:0004672|GO:0006468
Pral1787g00019 662 Gene3D Transferase(Phosphotransferase) domain 1 410 616 - -
Pral1787g00019 662 MobiDBLite consensus disorder prediction 630 662 - -
Pral1787g00019 662 FunFam cysteine-rich receptor-like protein kinase 10 410 612 - -
Pral1787g00019 662 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 28 652 - -
Pral1787g00019 662 ProSiteProfiles Gnk2-homologous domain profile. 24 131 IPR002902 -
Pral1787g00019 662 ProSiteProfiles Protein kinase domain profile. 334 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00019 662 Pfam Salt stress response/antifungal 31 128 IPR002902 -
Pral1787g00019 662 Pfam Salt stress response/antifungal 155 249 IPR002902 -
Pral1787g00019 662 Gene3D Phosphorylase Kinase; domain 1 296 409 - -
Pral1787g00019 662 FunFam Cysteine-rich receptor-like protein kinase 10 146 251 - -
Pral1787g00019 662 FunFam Cysteine-rich receptor-like protein kinase 10 298 409 - -
Pral1787g00019 662 CDD STKc_IRAK 340 605 - -
Pral1787g00019 662 SUPERFAMILY Protein kinase-like (PK-like) 312 605 IPR011009 -
Pral1787g00019 662 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00019 Pral-Chr1787 201941 205893 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00019 35 662 Receptor kinase-like Gene Family AT4G05200 47.239 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00019 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00019 - - tcc:108662469 647.891