Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00017 ATGAAGCTCTACAAAATTGATCCTCCTCCTCTCTCTGTTCTCATGATCTTCATGGCGATCCTTACAGTGATAGTAACCAGTTATAGAGCATCCGCCCAAACAGAGGAATATTACAACTGTCGAAACACTACATTTTTCTCTTCCAATAGTTCCTATCAAACCAATCTCGACCATCTCCTTTCATGGCTTTCCACAAATTCCACCCGCCAAAACGGTTTCTACTATGCCGCCGCCGGAAACTCCGATAGCACTGTCTACGGCGCCTTCCTCTGCCGTGGCGATCTCACCCCCGATGCCTGCCATGACTGCGCTTCCGTAGCGGCCAAACAAATACTCCGAAGGTGTCCTTTAGATAAAAAGTCAGTGATCTGGTTCAACGAGTGTATGTTACGTTACTCAGATGAGCCTTTCTCCTCCGTCAGTGAAGAAGCCCCCAGGCTTATTTTGATGAATACTGCGGCAAGCTTAAACCAGAGTAGCTTCATGTCACTGTTGGCTGAGACTATCAACGCGGCGGAGACGCAAGCCGTAAAGGGCGGGGCTGACAAGAAGTTTGCTACAAAAGAAGCCAAATTTTCTACTTTTCAAACGCTGTATACGCTAGCACAGTGCACGCCGGACTTAACAGAAACTACCTGCGAAACATGCTTAAAACGAGCAAGTTCGACCTTACCCAGTTGCTGCAATGGAAAAATAGGGGCCAGAGTCCTGCAAACTAGTTGTATTGTCCGATATGAAACGTACCCGTTCTACCAATCATCGCCGGTGATCACCCCGCGAGAACCAACGCCAAAAGGAAAAACCCGGATCTCTGTAGCCGTAGTCCTCGCGATTGTGGCTCCAATTACGACTGTTTTGCTGCTTTTCCTCCTTCTCTGCTGGTTAGGAACTAGAAGGGCAAGCAAGAAGCACATATTAGTGCCGCCAGCTGAAGAAAACGATGTTGAAATTTCCAGTGTGGAGCACGTGCAGTTTGATCTGGAAACAGTCAGATTGGCCACAAACAACTTCTCCCATGAAAATAAACTAGGCGAAGGAGGATTTGGTGAGGTTTTCAAGGGATCTCTTCCTAATGGGCAAGATATTGCAGTGAAGAGGCTTTCATTAAGCTCCAGGCAAGGTGCAGAAGAATTCAAGAATGAGGTGGTCTTAGTGGCCAACCTTCAACACAGAAACCTTGTTAGGCTATTGGGGTTTTGCTTGGATGGAGAAGAGAAGATCCTCATATATGAGTTCATTCCCAACAAGAGCTTGGATCATTTTCTTTTCAATGATGAAAGAAAAATTATGCTCAATTGGCCAAAACGATACAAGATCATACAAGGAATTGCTCGCGGAATACTTTACCTTCATGAAGACTCTCGGCTTAGAATCATACACCGTGATCTTAAAGCTAGTAATATATTATTAGATGAGAATTTGAATGCAAAAATTGCAGATTTTGGTATGGCAAAAATTTTTGGTGCTGATCAAACTCAAGGAAATACAAATAGAATTGTGGGAACCTTTGGTTATATGCCTCCGGAGTATGCAATGCATGGGAATCTGTCTGTCAAAGTGGATGTATATAGCTTTGGCGTGTTGATTTTGGAAATAATAAGCGGACAAAAGAGCACATCCTTTCAAGAACCCAACTACGATGAACATCTCCTGAACTATGCCTGGAGGAAATGGAAAGATGGGACGCCGTTGGAAGTGTTAGACGTGAGTTTGAGAGATTCTTATAATAGAGAGGAAGTGAGAAGATGCATCCAGATTGCATTAACATGTGTACAAGAAGATCCAGCTCAAAGGCCAACAATGCAGACAATAGTTCTGATGCTCAATAGTTACTCAGTTAGCGTAGCAATACCTGAGAGACCTCCATTTTTGGTTCACAGCAGAACTGTTGAGATCAGCCTTCCATCGAACTCCACAGATAAGTCTTCTCAAAGCAGATCAGCCCCATACTCTGTTGACGAAGCTTCCATCACTCAAGTGTACCCTCGATAG 1992 0.4438 MKLYKIDPPPLSVLMIFMAILTVIVTSYRASAQTEEYYNCRNTTFFSSNSSYQTNLDHLLSWLSTNSTRQNGFYYAAAGNSDSTVYGAFLCRGDLTPDACHDCASVAAKQILRRCPLDKKSVIWFNECMLRYSDEPFSSVSEEAPRLILMNTAASLNQSSFMSLLAETINAAETQAVKGGADKKFATKEAKFSTFQTLYTLAQCTPDLTETTCETCLKRASSTLPSCCNGKIGARVLQTSCIVRYETYPFYQSSPVITPREPTPKGKTRISVAVVLAIVAPITTVLLLFLLLCWLGTRRASKKHILVPPAEENDVEISSVEHVQFDLETVRLATNNFSHENKLGEGGFGEVFKGSLPNGQDIAVKRLSLSSRQGAEEFKNEVVLVANLQHRNLVRLLGFCLDGEEKILIYEFIPNKSLDHFLFNDERKIMLNWPKRYKIIQGIARGILYLHEDSRLRIIHRDLKASNILLDENLNAKIADFGMAKIFGADQTQGNTNRIVGTFGYMPPEYAMHGNLSVKVDVYSFGVLILEIISGQKSTSFQEPNYDEHLLNYAWRKWKDGTPLEVLDVSLRDSYNREEVRRCIQIALTCVQEDPAQRPTMQTIVLMLNSYSVSVAIPERPPFLVHSRTVEISLPSNSTDKSSQSRSAPYSVDEASITQVYPR 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00017 663 MobiDBLite consensus disorder prediction 634 654 - -
Pral1787g00017 663 FunFam cysteine-rich receptor-like protein kinase 10 413 615 - -
Pral1787g00017 663 Pfam Salt stress response/antifungal 40 134 IPR002902 -
Pral1787g00017 663 Pfam Salt stress response/antifungal 157 248 IPR002902 -
Pral1787g00017 663 Gene3D Transferase(Phosphotransferase) domain 1 413 617 - -
Pral1787g00017 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 659 - -
Pral1787g00017 663 Pfam Protein tyrosine and serine/threonine kinase 339 607 IPR001245 GO:0004672|GO:0006468
Pral1787g00017 663 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Pral1787g00017 663 ProSiteProfiles Protein kinase domain profile. 337 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00017 663 Gene3D - 33 137 IPR038408 -
Pral1787g00017 663 Gene3D - 146 250 IPR038408 -
Pral1787g00017 663 FunFam Cysteine-rich receptor-like protein kinase 10 298 412 - -
Pral1787g00017 663 Gene3D Phosphorylase Kinase; domain 1 299 412 - -
Pral1787g00017 663 ProSiteProfiles Gnk2-homologous domain profile. 143 250 IPR002902 -
Pral1787g00017 663 SUPERFAMILY Protein kinase-like (PK-like) 322 639 IPR011009 -
Pral1787g00017 663 CDD STKc_IRAK 343 609 - -
Pral1787g00017 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 33 137 - -
Pral1787g00017 663 ProSiteProfiles Gnk2-homologous domain profile. 34 137 IPR002902 -
Pral1787g00017 663 SMART serkin_6 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00017 663 FunFam Cysteine-rich receptor-like protein kinase 25 145 250 - -
Pral1787g00017 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pral1787g00017 663 MobiDBLite consensus disorder prediction 634 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00017 Pral-Chr1787 168464 171453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00017 11 663 Receptor kinase-like Gene Family AT4G05200 50.294 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00017 PK_Tyr_Ser-Thr 8.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00017 - - cit:127900229 728.013