Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00016 ATGCCTTCCCACAAAATTATCTTACTCTTTTTCTTTATTAGCTTTCTTAATTCTGCTACTACTCAAGCACAACCCGTCTATACTAACAGCAGCTGTTCTGGCCGCACCTTCGCTGCCAGTAGTTCCTTCCAATCCGACCTCACCAACCTCCTCTCTTCCTTAGCCTCCAACAAAACCGCCAACACCTATTTCTACAACACCACCGTCCACGGCGATCTCAACACCGTATACGGCCTCTTCATGTGCCGGGGTGACGTCACCCTCCAGTTGTGCCACCAGTGCGTCGTTGACGCAACGAAAAATATACGCTCCCAGTGCAACGTCTCGAGGGAGGCCGTGATATGGTACGAGGAGTGTATGGTTCGCTATTCCGACCGCTACTTCTTTTCCTCCGTCAACACGAATGCTAGTAGCTGCGGGGCCAACAACAACAACGTCGCCAACAACCAAACAGGATTCATGAATTTATTGTCGACAACTATGAACAAGGCGGCCGACGAGGCGGCCAAACCTGGTATGGGGAAGAAGTTTTTTGCGACAGAAGAAGCGAGTTTACAGTTTCAAACTATATATTGTCTGGTTCAGTGCACGCCGGACCTTTCTCCCCAAGGTTGCAGAACATGTCTGAGAGATGGGATTAGGGACCTTTTCAAGTGTAGTGACAAGAAGATAGGAGGAAGAGTTTTGTATCCCAGTTGTAACGTTCGCTATGAATTGTTCATCTTCTATAATTCTAACATGAAAGTGTCTGATGTTTATACAGGAAAAGCAAAGACCATTGTGATAGTTGTGGTTTCTGTTGGTGGTGCGGGGATACTTTTTTCTTTGGTGTACTATCTCTTAAGGAGTTTAATAAGGAAGAGACGGAGGGCTGAACTCAGACAAAAATACTTTGGAGATGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCCACTATTGAAGCCGCAACAAATAAGTTTTCACAGGAAAATTGTTTAGGCCAAGGTGGATTTGGACAGGTTTACAAGGGTATTCTTTCACATGGTCAAGAAATAGCTGTAAAGAGACTTTCAAAAGGTTCAGGCCAAGGGGCAGCAGAATTTAAAAATGAAGTATTATTAATAGCCAGACTGCAGCACAGAAATTTGGTGACCTTGCTGGGATTTTGCATAGAAGATCAAGAGAAAATTCTCATTTATGAATATGTTCCCAATAAAAGCCTTGACTACTTCCTATTTGGTTCGCAGGAAAATAGAAGACTAACTTGGGAGGAGCGTTATGAAATCATAAGAGGAGTTGCTCGAGGAATTCTATATCTTCATGAATATTCTCGTCTTAAAATTATACATCGTGATCTTAAACCTAGCAATATTTTGTTAGACAATGAAATGAATCCAAAAATTTCAGATTTTGGTCTCGCTAGGATGGTTGCTATCAATGAAAATGAAGGAAATACAAGGAGAATTGTCGGAACATATGGTTATATGCCTCCAGAATATGCGATGTTCGGGCTATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAAGAATGCAAGTTGTCATGATGAATCGCAGTATGCTGATAGCCTCTTAAGCTATACGTGGAATCAATGGAGTAATGAAAAGTTGTTCGAGATGTTGGATTCAAATCTAAAAGAAATGGAATCTTATAATGAAGTGAGCCGGTGCATCCAAATTGGATTGTTGTGTGTTCAAAGGCATCCAGATTCAAGACCTTCCATGGCTACAATTGTTTCATATCTGAGCAATGATTCAATTCAGTTGCCACATCCACAGCAACCTGCTTTCTTTTTGCGTGCTCGAAGGGTAATCACTTCTGCGAGTAGAGAATATAGCTCGATTAATGAAATGTCTCTGAGTGATTTCTTTCCTCGCTAG 1917 0.4152 MPSHKIILLFFFISFLNSATTQAQPVYTNSSCSGRTFAASSSFQSDLTNLLSSLASNKTANTYFYNTTVHGDLNTVYGLFMCRGDVTLQLCHQCVVDATKNIRSQCNVSREAVIWYEECMVRYSDRYFFSSVNTNASSCGANNNNVANNQTGFMNLLSTTMNKAADEAAKPGMGKKFFATEEASLQFQTIYCLVQCTPDLSPQGCRTCLRDGIRDLFKCSDKKIGGRVLYPSCNVRYELFIFYNSNMKVSDVYTGKAKTIVIVVVSVGGAGILFSLVYYLLRSLIRKRRRAELRQKYFGDESNTLEPLQFSLATIEAATNKFSQENCLGQGGFGQVYKGILSHGQEIAVKRLSKGSGQGAAEFKNEVLLIARLQHRNLVTLLGFCIEDQEKILIYEYVPNKSLDYFLFGSQENRRLTWEERYEIIRGVARGILYLHEYSRLKIIHRDLKPSNILLDNEMNPKISDFGLARMVAINENEGNTRRIVGTYGYMPPEYAMFGLYSEKSDVFSFGVIVLEIISGKKNASCHDESQYADSLLSYTWNQWSNEKLFEMLDSNLKEMESYNEVSRCIQIGLLCVQRHPDSRPSMATIVSYLSNDSIQLPHPQQPAFFLRARRVITSASREYSSINEMSLSDFFPR 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00016 638 FunFam cysteine-rich receptor-like protein kinase 10 398 601 - -
Pral1787g00016 638 FunFam Cysteine-rich receptor-like protein kinase 25 136 242 - -
Pral1787g00016 638 Pfam Protein tyrosine and serine/threonine kinase 325 594 IPR001245 GO:0004672|GO:0006468
Pral1787g00016 638 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 19 629 - -
Pral1787g00016 638 CDD STKc_IRAK 328 594 - -
Pral1787g00016 638 Gene3D Phosphorylase Kinase; domain 1 283 397 - -
Pral1787g00016 638 Pfam Salt stress response/antifungal 32 125 IPR002902 -
Pral1787g00016 638 Pfam Salt stress response/antifungal 139 238 IPR002902 -
Pral1787g00016 638 SUPERFAMILY Protein kinase-like (PK-like) 305 627 IPR011009 -
Pral1787g00016 638 SMART serkin_6 322 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00016 638 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 286 397 - -
Pral1787g00016 638 Gene3D Transferase(Phosphotransferase) domain 1 398 603 - -
Pral1787g00016 638 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Pral1787g00016 638 ProSiteProfiles Protein kinase domain profile. 322 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00016 638 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
Pral1787g00016 638 Gene3D - 133 242 IPR038408 -
Pral1787g00016 638 Gene3D - 24 128 IPR038408 -
Pral1787g00016 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Pral1787g00016 638 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Pral1787g00016 638 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 25 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00016 Pral-Chr1787 158854 161739 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00016 7 615 Receptor kinase-like Gene Family AT4G05200 44.953 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00016 PK_Tyr_Ser-Thr 8.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00016 - - pcin:129286093 981.474