Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00011 ATGACCTTCAACATTATAATTTTGTCACTCTTCTTCTTCATTGGCTTCCTCTTCAATTCTTCTTCTGCTCAAGTCATAGGTCGTAATGATCTTTACCCTCAGTGCTCCACCCGCAGTAACTTCACTGCCAATAGTACCTTCGACTCTAACCTCAAAACTCTCTTTTCTTCCTTAACTTCCAACAAAACCGCCAACCTCGACTTCTACAACACCACCGTTGGCCGCGGCGGCGAGACCATATACGGCCTCTTCATGTGCCGGGGTGACGTCAACCAAGACATATGCCGCCATTGCGTAGCTAACTCAACCCTACAGGTAGGTTCCGTATGCCGATTTTCGAAGGAGGCCGTAAACTGGCGCGATCAATGCTTGGTTCGCTATTCCGATCGCAACTTCTTCTCCACCGTCAATACGAGGCCTAGACTCCGAATGTTGAACCCTAACAATGTCTCGAATCAGGCAGGATTCATGAACGTATTGACGATTATTATGAACCAGACGGCGGATGAGGCTTCCAAGTCTGCCGTGATGAAGAAGAAGTTTAAGACGAACGCGGTGACGGTACAGTTTCAAACTCTGTACGTTCTGGTTCAGTGCACGCCTGACCTTTCGTCGGCGGATTGCAGAAGGTGTCTGAGCGGAGTGATTGGGGACTTCAGATGGTGTTGTGATGGGAAGATCGGAGGAAGAGTGCTATATCCAAGTTGCCTCGCTCGTTATGAGTTGTATCAGTTCTTTAATTCTTCAACGCCTCTTCGGCCAGTAACGCTGTCGCCTCCTCCGGCTCTACTTTCTCCTCCAAATCCTGTAAAAAGGAAAAGGCGATTAAGGACTATTTTGATAGCTGTGGCTTCTCCTGTTGGTGCTATGATACTTTTATGCTTCGCCTACTATTTATCAAAGAATCAGATAAAGAAGATACGTATGGCTTTTCTCATGCGAAAGTACTTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCAGTTTGGCTACGATTGAAGCAGCGACAAATAAGTTTTCGAAGGAAACTAGTTTAGGTCGGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGTGAAGAGATAGCTGTAAAAAGACTTTCGAAAAGTTCTGGCCAAGGAGCAGAAGAATTTAAGAATGAAGTTTTGCTAATAGCCACGCTCCAGCATAGAAATTTGGTGGCCTTACTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCGCAACAAAAGTCTTGATTACTTCCTGTTTGGTTCTCAAGAAAGCAAAGTGTTAAATTGGGAGGAACGTCACAAAATTATCGGAGGAGTTGCTAGAGGAATTCTTTACCTTCATGACTATTCTCGGGTTAAAATTATACATCGTGATCTCAAACCTAGTAATATTTTGTTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGGATGGTTGGATTCAATGAAATTGAAGGAAGTACAAAAAAAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTCAGTTTTGGAGTAATAGTATTAGAAATGATCAGTGGAAGAAAGATCACAAGCTCTCAGGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGATGGAAGAAAAGATATTAGAGGTATTGGATTCAAGCCTAAATGAACCTGAATCGTTGAATGAAGTGAACAAGTGCATCCAAATTGGGTTGTTATGCGTTCAAGAAAATCCAGAGGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCGATTCATTTGCCATTTCCACAAGAACCTGCATTCTTTCTGGAGGGCCAAATGGAGCTTAATACCGACAGTCAAGAATCTATTAATGAAATGTCTATAAGTGAATTCTATTCTCGATAG 1959 0.4176 MTFNIIILSLFFFIGFLFNSSSAQVIGRNDLYPQCSTRSNFTANSTFDSNLKTLFSSLTSNKTANLDFYNTTVGRGGETIYGLFMCRGDVNQDICRHCVANSTLQVGSVCRFSKEAVNWRDQCLVRYSDRNFFSTVNTRPRLRMLNPNNVSNQAGFMNVLTIIMNQTADEASKSAVMKKKFKTNAVTVQFQTLYVLVQCTPDLSSADCRRCLSGVIGDFRWCCDGKIGGRVLYPSCLARYELYQFFNSSTPLRPVTLSPPPALLSPPNPVKRKRRLRTILIAVASPVGAMILLCFAYYLSKNQIKKIRMAFLMRKYFGSESNTLEPLQFSLATIEAATNKFSKETSLGRGGFGQVYKGILSNGEEIAVKRLSKSSGQGAEEFKNEVLLIATLQHRNLVALLGFCIEEQEKILIYEYVRNKSLDYFLFGSQESKVLNWEERHKIIGGVARGILYLHDYSRVKIIHRDLKPSNILLDDEMNPKISDFGMARMVGFNEIEGSTKKIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEMISGRKITSSQDQSHGLLNYAWNQWMEEKILEVLDSSLNEPESLNEVNKCIQIGLLCVQENPEARPSMATVVSYLSNDSIHLPFPQEPAFFLEGQMELNTDSQESINEMSISEFYSR 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00011 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Pral1787g00011 652 ProSiteProfiles Protein kinase domain profile. 341 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00011 652 Gene3D - 29 132 IPR038408 -
Pral1787g00011 652 Gene3D - 139 245 IPR038408 -
Pral1787g00011 652 Gene3D Phosphorylase Kinase; domain 1 303 416 - -
Pral1787g00011 652 ProSiteProfiles Gnk2-homologous domain profile. 138 245 IPR002902 -
Pral1787g00011 652 SMART serkin_6 341 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00011 652 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Pral1787g00011 652 Pfam Salt stress response/antifungal 149 243 IPR002902 -
Pral1787g00011 652 CDD STKc_IRAK 347 610 - -
Pral1787g00011 652 Pfam Protein kinase domain 342 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00011 652 ProSiteProfiles Gnk2-homologous domain profile. 29 132 IPR002902 -
Pral1787g00011 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 132 - -
Pral1787g00011 652 FunFam Cysteine-rich receptor-like protein kinase 25 140 245 - -
Pral1787g00011 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 648 - -
Pral1787g00011 652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 417 618 - -
Pral1787g00011 652 SUPERFAMILY Protein kinase-like (PK-like) 324 635 IPR011009 -
Pral1787g00011 652 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Pral1787g00011 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 304 416 - -
Pral1787g00011 652 Gene3D Transferase(Phosphotransferase) domain 1 417 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00011 Pral-Chr1787 89333 125754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00011 9 627 Receptor kinase-like Gene Family AT4G05200 45.925 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00011 Pkinase 4.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00011 - - pcin:129286093 1051.2