Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00008 ATGTGTGAAGAGAATCATATGCGAATGCGAAACGCAGAAACAACTTCGGTTTTGCCGATTTTGCGTCTTGGTGTTCCGCCGACACCACTTTGGGGAGTGACATTGAGACGCGGAAATATTCTATATACAGTAAAAAGGAAAAGGCGATTAAGGACTATTTTGATAGCTGTGGCTTCTCCTGTTGGTGCCATGACACTTTTATGCTTCGCCTACTATTTATCAAAGAATCAGATAAAGAAGATACTTGGAAGCGAAAGCAACACTTTAGAGCCTCTGCAATTCGGTTTGGCTACGATTGAAGCAGCGACAAATAAGTTTTCAAAGCAAACTAGTTTAGGTCAGGGTGGATTTGGACAAGTTTACAAGGGCATTCTTTCAAATGGCCAAGAGATAGCGGTAAAAAGACTTTCGAAAAGTTCTGGCCAAGGAGCAGAAGAATTTAAGAATGAAGTTTTGCTAATAGCCAGGCTCCAGCATAGAAATTTGGTGGCCTTGCTAGGATTTTGCATAGAAGAGCAAGAGAAAATTCTCATTTATGAATATGTTCCCAACAGAAGTCTTGATTACTTCCTGTTTGGTTCACAAGAAAGCAAAGTGTTAAATTGGGAGGAACGTCACAAAATTATTGGAGGAGTTGCTAGAGGAATTCTTTACCTTCATGACTATTCTCGAGTCAAAATTATACATCGTGATCTCAAACCTAATAATATTTTGCTAGATGATGAAATGAACCCAAAAATTTCAGATTTTGGCATGGCTAGGATGGTTGGATTCAATGACATTGAAGGAAGTACAAATAAAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAATATTCTGAAAAATCAGATGCTTTTAGCTTTGGAGTGATAGTATTAGAAATTATTAGTGGAAAGAAGATCACAAGTTCTCCTGATCAATCTCATGGCCTCCTAAACTATGCTTGGAATCAATGGAAGGAAGAAAAGATCTTAGAGATCGCGATACTGGATTCAAATCTAAATGAATCTGAATCGTTGAATGAAGTGAACAAGTGCATCCAAATCGGGTTGTTATGCGTTCAAGAAAATCCAGAAGCAAGGCCTTCTATGGCTACAGTTGTTTCATATCTTAGCAATGATTCAATTCAATTGCCATTTCCCCAGGAACCTGCTTTCTTTCTGGAGGGCCAAATGGAGCTTAATACCGACAGTAAAGAATCAATTAATGAAATGTTTATAAGTGAATTCCATCCTCGGTAG 1260 0.381 MCEENHMRMRNAETTSVLPILRLGVPPTPLWGVTLRRGNILYTVKRKRRLRTILIAVASPVGAMTLLCFAYYLSKNQIKKILGSESNTLEPLQFGLATIEAATNKFSKQTSLGQGGFGQVYKGILSNGQEIAVKRLSKSSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKILIYEYVPNRSLDYFLFGSQESKVLNWEERHKIIGGVARGILYLHDYSRVKIIHRDLKPNNILLDDEMNPKISDFGMARMVGFNDIEGSTNKIVGTYGYMSPEYAMFGQYSEKSDAFSFGVIVLEIISGKKITSSPDQSHGLLNYAWNQWKEEKILEIAILDSNLNESESLNEVNKCIQIGLLCVQENPEARPSMATVVSYLSNDSIQLPFPQEPAFFLEGQMELNTDSKESINEMFISEFHPR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00008 419 SMART serkin_6 106 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00008 419 CDD STKc_IRAK 112 377 - -
Pral1787g00008 419 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 73 181 - -
Pral1787g00008 419 Gene3D Phosphorylase Kinase; domain 1 70 181 - -
Pral1787g00008 419 ProSiteProfiles Protein kinase domain profile. 106 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00008 419 SUPERFAMILY Protein kinase-like (PK-like) 90 398 IPR011009 -
Pral1787g00008 419 Gene3D Transferase(Phosphotransferase) domain 1 182 384 - -
Pral1787g00008 419 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 51 403 - -
Pral1787g00008 419 Pfam Protein kinase domain 107 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00008 419 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Pral1787g00008 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Pral1787g00008 419 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 182 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00008 Pral-Chr1787 40655 42776 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00008 88 419 Receptor kinase-like Gene Family AT3G45860 54.467 9.34e-129 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00008 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00008 - - pcin:129286093 618.616