Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00004 ATGGATATGCCATTTCTGAAACTGCTATCCTGCTTTCTGCTTCTCTCCTCCTTCGATCTGGCTTCTTCTGAAGTTGACAGCCCTGCTTACTTTGACCACAACTGCACAACCAATAAAAACTTCACTTCCAATAGCCCCTACCAGTTCAACCTTAACACTCTCTTCGGTATCTTGTATAAAAAGGCCGCCGGCGGTGATACTCCCGAATTTTTCAACACCAGCTATGCCGACGTCGTATATGGCGAGTTCATGTGCCGAGGTGACGTCCCCATTCAGGTCTGTCGAGATTGCGTTCAGGATGCCATAAATCGAATAGCCTCAGAATGTCCCTACAACAAAGAGGCAGTCATCTGGTACGACCAGTGCTCCCTCCGCTATTCCGATCGTTCTTTCTTCTCCACCCTCGATCAACTGCCTAGAGTTAGCAGCCGGTTGGTGGACGTGGTCCCGATAACCAGCTGTACTCTTAACCCATCATCATCATGCAGCCAGATTCCATCCCATCCATATGACAGAAATCAAACAAGGATGGAGGACGTGAGGCCGACAAGGAATAATTCAAACCCAGAGGCATACGCAGAATTAAATAAGACGTTGAATGATGCGGTGGTGGAGGCAGCAACGTCAGGTGCCAAGAAATTTGCAGCGAAAGAAGCAAACTTTAGTGGGGGATCGCTGTACACTCTTGTACAGTGCACGCCGAATCTGTCCCAACAATTCTGCAGCAAGTGTCTATATGGCATCATGAATCTTCTTCCAAAAGAAAATACTACACGCAGAGGAAGAATTCAGAATCCGAGCTGCGGTTTGAGATTCGGAGAAGACCGATTTTATTACAAGGGCGACCAGCCTCCCTCCACTGCATCTGAAGGGCTTGGACGTCCTGATCTTACAGGCAGCAACTGCTCGACCACCGAAGCCGACGATCAGTACCTAAACAACCTCAGAAATCTCACTCAACAACTCTCCAAGGCATCCAACGACACCAAAAACAAAGGATTCTACAGCACCAGCGTCGGAAACAAGCCGGACACCATCAACGGCCTCTTCATGTGTCGGGGAGATGTGCCCCTTGAGCTCTGCCATGAATGCGTCAATGAGGGAATCGAGCAACTAAACTTTTCGTGTCCCAATTCAAAGGAGGCTATCATATGGTATGATTTGTGTATGCTTCGCTATTCCAATCGCTTTTTCCTCTCTACCCTGGACACACTGCCTGTATATACAAAACCCGGTGGGGATATGCTTGAAAACGAAACAAAGACCTTCAATCGGCTGTTAGGGAATACATTGAATGATCTAGTGGCGGCAACGACGAACTCATCAGAGAGTGTAGGAGTGAAAAATTTTGAGACAAACACAAAATCCAGCGATTTAGAGTTGAAAACGTTGTATACTCTTGCACAATGTACTCCAAACCTGTCCAGCCAAGACTGCAGAAAATGTCTACAAGGTGCTTTGCAAAATATCATGTCATGTTGTTCTGCAAAGAAAGGAGGACAGGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACATATTTTATAATGACAGTAAAAATGTTGTTTCGGTGCCACCTGCGTATCCCCCAGATGATACAGGTCCCCCAGGAAATCCAGGAGAAGATAACGACCACTCACGAACAATTATAATAGCGGTGGTGTCTGTCACTATTGGCTCAATCATGCTCCTTTGTTTCGGCTACTATTACTGGCAGAGAAAAAGGAGCAAGAGCTATAAGGAGATTCTGAAGAAAAACTTTGGAAGTGAAGGAGCCATGTTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCAACTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTTCAAGGGCATTCTTCCCGATGGCAGCAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTATTAGAATTCAAGAATGAGGTTCTATTAATTGCCAAACTTCAACATAGAAACCTGGTGGCACTATTAGGATTTTGCCTGAAAGACGAAGAAAAAATACTTGTTTATGAATATGTTCCCAACAAGAGTCTGGATTACTTTTTATTTGGTTCACAAAAGCCAAGAACGTTAAAATGGCTTGAGTGTCATAAAATTATAGGAGGAATTGCTCGAGGAATTCTTTATCTCCATGAACATTCACGTCTTAAAGTAATACATCGAGATCTCAAACCTAGCAACATATTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTTGGCCTTGCAAGAATGGTTGGCATTAATGAAACTAGGGGAAACACAAATAGAATTGTTGGAACATTGGGTTATATGTCTCCAGAATATATTAAGTTTGGACTATTTTCTGAAAAATCAGATGTTTTCAGCTTTGGGGTGATGGTTTTAGAAATCATTAGTGGAAAGAAGAATATAAATTCTCATCGTCAATATCCTGAATCTCAATATGCTGATGGACTATTAAGTAATGCTTGGAAGCATTGGAGGGACGAAAAATTGATAGAGATGTTGGATCCAAATCTGACGGAAGCTGGGTCACACAGTGAAATAATCAGATGCGTCCATATCGGCTTGTTGTGTGTTCAAGGAAATCCAGAAGTAAGGCCTTCCATGAATGAAGTTGTTCAATATCTAAGTAATGATTCAATTCAACTACCAATTCCTCAAGAGCCAGCATTCTTCATACATAGTCAAATGGAACCAGTAGCAACCACTACAAGTATGGAGGGTCAGCTTGCCAACCACAATCAATATTCCATCAATGAAATGTCGAAGAGTACACTATTTCCTCGTTAG 2826 0.4278 MDMPFLKLLSCFLLLSSFDLASSEVDSPAYFDHNCTTNKNFTSNSPYQFNLNTLFGILYKKAAGGDTPEFFNTSYADVVYGEFMCRGDVPIQVCRDCVQDAINRIASECPYNKEAVIWYDQCSLRYSDRSFFSTLDQLPRVSSRLVDVVPITSCTLNPSSSCSQIPSHPYDRNQTRMEDVRPTRNNSNPEAYAELNKTLNDAVVEAATSGAKKFAAKEANFSGGSLYTLVQCTPNLSQQFCSKCLYGIMNLLPKENTTRRGRIQNPSCGLRFGEDRFYYKGDQPPSTASEGLGRPDLTGSNCSTTEADDQYLNNLRNLTQQLSKASNDTKNKGFYSTSVGNKPDTINGLFMCRGDVPLELCHECVNEGIEQLNFSCPNSKEAIIWYDLCMLRYSNRFFLSTLDTLPVYTKPGGDMLENETKTFNRLLGNTLNDLVAATTNSSESVGVKNFETNTKSSDLELKTLYTLAQCTPNLSSQDCRKCLQGALQNIMSCCSAKKGGQVMNPSCNLRFESYIFYNDSKNVVSVPPAYPPDDTGPPGNPGEDNDHSRTIIIAVVSVTIGSIMLLCFGYYYWQRKRSKSYKEILKKNFGSEGAMLESLQFNLATIEAATDKFSTENRIGKGGFGEVFKGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDEEKILVYEYVPNKSLDYFLFGSQKPRTLKWLECHKIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGLARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVFSFGVMVLEIISGKKNINSHRQYPESQYADGLLSNAWKHWRDEKLIEMLDPNLTEAGSHSEIIRCVHIGLLCVQGNPEVRPSMNEVVQYLSNDSIQLPIPQEPAFFIHSQMEPVATTTSMEGQLANHNQYSINEMSKSTLFPR 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00004 941 SMART serkin_6 613 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00004 941 FunFam cysteine-rich receptor-like protein kinase 10 689 895 - -
Pral1787g00004 941 ProSitePatterns Serine/Threonine protein kinases active-site signature. 734 746 IPR008271 GO:0004672|GO:0006468
Pral1787g00004 941 CDD STKc_IRAK 619 888 - -
Pral1787g00004 941 MobiDBLite consensus disorder prediction 163 186 - -
Pral1787g00004 941 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 938 - -
Pral1787g00004 941 ProSiteProfiles Gnk2-homologous domain profile. 29 131 IPR002902 -
Pral1787g00004 941 Coils Coil 308 332 - -
Pral1787g00004 941 MobiDBLite consensus disorder prediction 527 546 - -
Pral1787g00004 941 ProSiteProfiles Gnk2-homologous domain profile. 293 398 IPR002902 -
Pral1787g00004 941 Gene3D Phosphorylase Kinase; domain 1 574 688 - -
Pral1787g00004 941 SUPERFAMILY Protein kinase-like (PK-like) 598 916 IPR011009 -
Pral1787g00004 941 Gene3D - 294 398 IPR038408 -
Pral1787g00004 941 Gene3D - 414 516 IPR038408 -
Pral1787g00004 941 Gene3D - 28 131 IPR038408 -
Pral1787g00004 941 Gene3D - 174 277 IPR038408 -
Pral1787g00004 941 ProSiteProfiles Protein kinase domain profile. 613 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00004 941 ProSiteProfiles Gnk2-homologous domain profile. 174 277 IPR002902 -
Pral1787g00004 941 Gene3D Transferase(Phosphotransferase) domain 1 689 895 - -
Pral1787g00004 941 Pfam Protein kinase domain 614 886 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00004 941 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 574 688 - -
Pral1787g00004 941 Pfam Salt stress response/antifungal 302 395 IPR002902 -
Pral1787g00004 941 Pfam Salt stress response/antifungal 185 273 IPR002902 -
Pral1787g00004 941 Pfam Salt stress response/antifungal 419 514 IPR002902 -
Pral1787g00004 941 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pral1787g00004 941 ProSiteProfiles Gnk2-homologous domain profile. 404 516 IPR002902 -
Pral1787g00004 941 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00004 Pral-Chr1787 12847 18954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00004 301 907 Receptor kinase-like Gene Family AT4G23230 43.719 8.28e-171 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00004 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00004 - - pcin:129286968 872.848