Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00003 ATGGATATGCCATTTCTGAAACTGCTATCCTGCTTTCTGCTTCTCTCCTCCTTCGATCTGGCTTCTTCTGAAGTTGACAGCCCTGCTTACTTTGACCACAACTGCACAACCAATAAAAACTTCACTTCCAATAGCCCCTACCAGTTCAACCTTAACACTCTCTTCGGTATCTTGTATAAAAAGGCCGCCGGCGGTGATACTCCCGAATTTTTCAACACCAGCTATGCCGACGTCGTATATGGCGAGTTCATGTGCCGAGGTGACGTCCCCATTCAGGTCTGTCGAGATTGCGTTCAGGATGCCATAAATCGAATAGCCTCAGAATGTCCCTACAACAAAGAGGCAGTCATCTGGTACGACCAGTGCTCCCTCCGCTATTCCGATCGTTCTTTCTTCTCCACCCTCGATCAACTGCCTAGAGTTAGCAGCCGGTTGGTGGACGTGGTCCCGATAACCAGCTGTACTCTTAACCCATCATCATCATGCAGCCAGATTCCATCCCATCCATATGACAGAAATCAAACAAGGATGGAGGACGTGAGGCCGACAAGGAATAATTCAAACCCAGAGGCATACGCAGAATTAAATAAGACGTTGAATGATGCGGTGGTGGAGGCAGCAACGTCAGGTGCCAAGAAATTTGCAGCGAAAGAAGCAAACTTTAGTGGGGGATCGCTGTACACTCTTGTACAGTGCACGCCGAATCTGTCCCAACAATTCTGCAGCAAGTGTCTATATGGCATCATGAATCTTCTTCCAAAAGAAAATACTACACGCAGAGGAAGAATTCAGAATCCGAGCTGCGGTTTGAGATTCGGAGAAGACCGATTTTATTACAAGGGCGACCAGCCTCCCTCCACTGCATCTGAAGGGCTTGGACGTCCTGATCTTACAGGCAGCAACTGCTCGACCACCGAAGCCGACGATCAGTACCTAAACAACCTCAGAAATCTCACTCAACAACTCTCCAAGGCATCCAACGACACCAAAAACAAAGGATTCTACAGCACCAGCGTCGGAAACAAGCCGGACACCATCAACGGCCTCTTCATGTGTCGGGGAGATGTGCCCCTTGAGCTCTGCCATGAATGCGTCAATGAGGGAATCGAGCAACTAAACTTTTCGTGTCCCAATTCAAAGGAGGCTATCATATGGTATGATTTGTGTATGCTTCGCTATTCCAATCGCTTTTTCCTCTCTACCCTGGACACACTGCCTGTATATACAAAACCCGGTGGGGATATGCTTGAAAACGAAACAAAGACCTTCAATCGGCTGTTAGGGAATACATTGAATGATCTAGTGGCGGCAACGACGAACTCATCAGAGAGTGTAGGAGTGAAAAATTTTGAGACAAACACAAAATCCAGCGATTTAGAGTTGAAAACGTTGTATACTCTTGCACAATGTACTCCAAACCTGTCCAGCCAAGACTGCAGAAAATGTCTACAAGGTGCTTTGCAAAATATCATGTCATGTTGTTCTGCAAAGAAAGGAGGACAGGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACATATTTTATAATGACAGTAAAAATGTTGTTTCGGTGCCACCTGCGTATCCCCCAGATGATACAGGTCCCCCAGGAGAAGATAACGACCACTCACGAACAATTATAATAGCGGTGGTGTCTGTCACTATTGGCTCAATCATGCTCCTTTGTTTCGGCTACTATTACTGGCAGAGAAAAAGGAGCAAGAGCTATAAGGAGATTCTGAAGAAAAACTTTGGAAGTGAAGGAGCCATGTTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCAACTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTTCAAGGGCATTCTTCCCGATGGCAGCAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTATTAGAATTCAAGAATGAGGTTCTATTAATTGCCAAACTTCAACATAGAAACCTGGTGGCACTATTAGGATTTTGCCTGAAAGACGAAGAAAAAATACTTGTTTATGAATATGTTCCCAACAAGAGTCTGGATTACTTTTTATTTGGTTCACAAAAGCCAAGAACGTTAAAATGGCTTGAGTGTCATAAAATTATAGGAGGAATTGCTCGAGGAATTCTTTATCTCCATGAACATTCACGTCTTAAAGTAATACATCGAGATCTCAAACCTAGCAACATATTGTTAGATGATGAGATGAATCCAAAAATTTCTGATTTTGGCCTTGCAAGAATGGTTGGCATTAATGAAACTAGGGGAAACACAAATAGAATTGTTGGAACATTGGGTTATATGTCTCCAGAATATATTAAGTTTGGACTATTTTCTGAAAAATCAGATGTTTTCAGCTTTGGGGTGATGGTTTTAGAAATCATTAGTGGAAAGAAGAATATAAATTCTCATCGTCAATATCCTGAATCTCAATATGCTGATGGACTATTAAGTAATGCTTGGAAGCATTGGAGGGACGAAAAATTGATAGAGATGTTGGATCCAAATCTGACGGAAGCTGGGTCACACAGTGAAATAATCAGATGCGTCCATATCGGCTTGTTGTGTGTTCAAGGAAATCCAGAAGTAAGGCCTTCCATGAATGAAGTTGTTCAATATCTAAGTAATGATTCAATTCAACTACCAATTCCTCAAGAGCCAGCATTCTTCATACATAGTCAAATGGAACCAGTAGCAACCACTACAAGTATGGAGGGTCAGCTTGCCAACCACAATCAATATTCCATCAATGAAATGTCGAAGAGTACACTATTTCCTCGTTAG 2817 0.4278 MDMPFLKLLSCFLLLSSFDLASSEVDSPAYFDHNCTTNKNFTSNSPYQFNLNTLFGILYKKAAGGDTPEFFNTSYADVVYGEFMCRGDVPIQVCRDCVQDAINRIASECPYNKEAVIWYDQCSLRYSDRSFFSTLDQLPRVSSRLVDVVPITSCTLNPSSSCSQIPSHPYDRNQTRMEDVRPTRNNSNPEAYAELNKTLNDAVVEAATSGAKKFAAKEANFSGGSLYTLVQCTPNLSQQFCSKCLYGIMNLLPKENTTRRGRIQNPSCGLRFGEDRFYYKGDQPPSTASEGLGRPDLTGSNCSTTEADDQYLNNLRNLTQQLSKASNDTKNKGFYSTSVGNKPDTINGLFMCRGDVPLELCHECVNEGIEQLNFSCPNSKEAIIWYDLCMLRYSNRFFLSTLDTLPVYTKPGGDMLENETKTFNRLLGNTLNDLVAATTNSSESVGVKNFETNTKSSDLELKTLYTLAQCTPNLSSQDCRKCLQGALQNIMSCCSAKKGGQVMNPSCNLRFESYIFYNDSKNVVSVPPAYPPDDTGPPGEDNDHSRTIIIAVVSVTIGSIMLLCFGYYYWQRKRSKSYKEILKKNFGSEGAMLESLQFNLATIEAATDKFSTENRIGKGGFGEVFKGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDEEKILVYEYVPNKSLDYFLFGSQKPRTLKWLECHKIIGGIARGILYLHEHSRLKVIHRDLKPSNILLDDEMNPKISDFGLARMVGINETRGNTNRIVGTLGYMSPEYIKFGLFSEKSDVFSFGVMVLEIISGKKNINSHRQYPESQYADGLLSNAWKHWRDEKLIEMLDPNLTEAGSHSEIIRCVHIGLLCVQGNPEVRPSMNEVVQYLSNDSIQLPIPQEPAFFIHSQMEPVATTTSMEGQLANHNQYSINEMSKSTLFPR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00003 938 CDD STKc_IRAK 616 885 - -
Pral1787g00003 938 ProSitePatterns Protein kinases ATP-binding region signature. 616 638 IPR017441 GO:0005524
Pral1787g00003 938 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 571 685 - -
Pral1787g00003 938 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Pral1787g00003 938 MobiDBLite consensus disorder prediction 163 186 - -
Pral1787g00003 938 ProSiteProfiles Gnk2-homologous domain profile. 29 131 IPR002902 -
Pral1787g00003 938 Coils Coil 308 332 - -
Pral1787g00003 938 SMART serkin_6 610 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00003 938 ProSiteProfiles Gnk2-homologous domain profile. 293 398 IPR002902 -
Pral1787g00003 938 Gene3D - 294 398 IPR038408 -
Pral1787g00003 938 Gene3D - 414 516 IPR038408 -
Pral1787g00003 938 Gene3D - 28 131 IPR038408 -
Pral1787g00003 938 Gene3D - 174 277 IPR038408 -
Pral1787g00003 938 Pfam Salt stress response/antifungal 302 395 IPR002902 -
Pral1787g00003 938 Pfam Salt stress response/antifungal 185 273 IPR002902 -
Pral1787g00003 938 Pfam Salt stress response/antifungal 419 514 IPR002902 -
Pral1787g00003 938 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pral1787g00003 938 ProSiteProfiles Gnk2-homologous domain profile. 174 277 IPR002902 -
Pral1787g00003 938 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 309 935 - -
Pral1787g00003 938 Pfam Protein kinase domain 611 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00003 938 Gene3D Transferase(Phosphotransferase) domain 1 686 892 - -
Pral1787g00003 938 FunFam cysteine-rich receptor-like protein kinase 10 686 892 - -
Pral1787g00003 938 ProSiteProfiles Protein kinase domain profile. 610 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00003 938 SUPERFAMILY Protein kinase-like (PK-like) 595 913 IPR011009 -
Pral1787g00003 938 ProSiteProfiles Gnk2-homologous domain profile. 404 516 IPR002902 -
Pral1787g00003 938 Gene3D Phosphorylase Kinase; domain 1 571 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00003 Pral-Chr1787 12844 18954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00003 301 904 Receptor kinase-like Gene Family AT4G23230 44.209 7.74e-170 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00003 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00003 - - pcin:129286968 874.389