Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1787g00001 ATGGATATGCCATTTCTGAAACTGCTATCCTGCTTTCTGCTTCTCTCCTCCTTCGATCTGGCTTCTTCTGAAGTTGACAGCCCTGCTTACTTTGACCACAACTGCACAACCAATAAAAACTTCACTTCCAATAGCCCCTACCAGTTCAACCTTAACACTCTCTTCGGTATCTTGTATAAAAAGGCCGCCGGCGGTGATACTCCCGAATTTTTCAACACCAGCTATGCCGACGTCGTATATGGCGAGTTCATGTGCCGAGGTGACGTCCCCATTCAGGTCTGTCGAGATTGCGTTCAGGATGCCATAAATCGAATAGCCTCAGAATGTCCCTACAACAAAGAGGCAGTCATCTGGTACGACCAGTGCTCCCTCCGCTATTCCGATCGTTCTTTCTTCTCCACCCTCGATCAACTGCCTAGAGTTAGCAGCCGGTTGGTGGACGTGGTCCCGATAACCAGCTGTACTCTTAACCCATCATCATCATGCAGCCAGATTCCATCCCATCCATATGACAGAAATCAAACAAGGATGGAGGACGTGAGGCCGACAAGGAATAATTCAAACCCAGAGGCATACGCAGAATTAAATAAGACGTTGAATGATGCGGTGGTGGAGGCAGCAACGTCAGGTGCCAAGAAATTTGCAGCGAAAGAAGCAAACTTTAGTGGGGGATCGCTGTACACTCTTGTACAGTGCACGCCGAATCTGTCCCAACAATTCTGCAGCAAGTGTCTATATGGCATCATGAATCTTCTTCCAAAAGAAAATACTACACGCAGAGGAAGAATTCAGAATCCGAGCTGCGGTTTGAGATTCGGAGAAGACCGATTTTATTACAAGGGCGACCAGCCTCCCTCCACTGCATCTGAAGGGCTTGGACGTCCTGATCTTACAGGCAGCAACTGCTCGACCACCGAAGCCGACGATCAGTACCTAAACAACCTCAGAAATCTCACTCAACAACTCTCCAAGGCATCCAACGACACCAAAAACAAAGGATTCTACAGCACCAGCGTCGGAAACAAGCCGGACACCATCAACGGCCTCTTCATGTGTCGGGGAGATGTGCCCCTTGAGCTCTGCCATGAATGCGTCAATGAGGGAATCGAGCAACTAAACTTTTCGTGTCCCAATTCAAAGGAGGCTATCATATGGTATGATTTGTGTATGCTTCGCTATTCCAATCGCTTTTTCCTCTCTACCCTGGACACACTGCCTGTATATACAAAACCCGGTGGGGATATGCTTGAAAACGAAACAAAGACCTTCAATCGGCTGTTAGGGAATACATTGAATGATCTAGTGGCGGCAACGACGAACTCATCAGAGAGTGTAGGAGTGAAAAATTTTGAGACAAACACAAAATCCAGCGATTTAGAGTTGAAAACGTTGTATACTCTTGCACAATGTACTCCAAACCTGTCCAGCCAAGACTGCAGAAAATGTCTACAAGGTGCTTTGCAAAATATCATGTCATGTTGTTCTGCAAAGAAAGGAGGACAGGTCATGAATCCTAGCTGCAACTTGAGGTTTGAATCGTACATATTTTATAATGACAGTAAAAATGTTGTTTCGGTGCCACCTGCGTATCCCCCAGATGATACAGGTCCCCCAGGAAATCCAGGAGAAGATAACGACCACTCACGAACAATTATAATAGCGGTGGTGTCTGTCACTATTGGCTCAATCATGCTCCTTTGTTTCGGCTACTATTACTGGCAGAGAAAAAGGAGCAAGAGCTATAAGGAGATTCTGAAGAAAAACTTTGGAAGTGAAGGAGCCATGTTAGAGTCATTGCAGTTCAATTTGGCAACAATTGAAGCTGCAACAGATAAGTTCTCAACTGAAAATAGAATAGGCAAAGGTGGATTTGGAGAAGTCTTCAAGGGCATTCTTCCCGATGGCAGCAAAATAGCTGTAAAGAGATTGTCAGAAAATTCTAGTCAGGGCTTATTAGAATTCAAGAATGAGGTTCTATTAATTGCCAAACTTCAACATAGAAACCTGGTGGCACTATTAGGATTTTGCCTGAAAGACGAAGAAAAAATACTTGTTTATGAATATGTTCCCAACAAGAGTCTGGATTACTTTTTATTTGGGGTTATATGTCTCCAGAATATATTAAGTTTGGACTATTTTCTGAAAAATCAGATGTTTTCAGCTTTGGGGTGA 2172 0.4448 MDMPFLKLLSCFLLLSSFDLASSEVDSPAYFDHNCTTNKNFTSNSPYQFNLNTLFGILYKKAAGGDTPEFFNTSYADVVYGEFMCRGDVPIQVCRDCVQDAINRIASECPYNKEAVIWYDQCSLRYSDRSFFSTLDQLPRVSSRLVDVVPITSCTLNPSSSCSQIPSHPYDRNQTRMEDVRPTRNNSNPEAYAELNKTLNDAVVEAATSGAKKFAAKEANFSGGSLYTLVQCTPNLSQQFCSKCLYGIMNLLPKENTTRRGRIQNPSCGLRFGEDRFYYKGDQPPSTASEGLGRPDLTGSNCSTTEADDQYLNNLRNLTQQLSKASNDTKNKGFYSTSVGNKPDTINGLFMCRGDVPLELCHECVNEGIEQLNFSCPNSKEAIIWYDLCMLRYSNRFFLSTLDTLPVYTKPGGDMLENETKTFNRLLGNTLNDLVAATTNSSESVGVKNFETNTKSSDLELKTLYTLAQCTPNLSSQDCRKCLQGALQNIMSCCSAKKGGQVMNPSCNLRFESYIFYNDSKNVVSVPPAYPPDDTGPPGNPGEDNDHSRTIIIAVVSVTIGSIMLLCFGYYYWQRKRSKSYKEILKKNFGSEGAMLESLQFNLATIEAATDKFSTENRIGKGGFGEVFKGILPDGSKIAVKRLSENSSQGLLEFKNEVLLIAKLQHRNLVALLGFCLKDEEKILVYEYVPNKSLDYFLFGVICLQNILSLDYFLKNQMFSALG 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1787g00001 723 Pfam Protein tyrosine and serine/threonine kinase 615 698 IPR001245 GO:0004672|GO:0006468
Pral1787g00001 723 ProSiteProfiles Gnk2-homologous domain profile. 174 277 IPR002902 -
Pral1787g00001 723 MobiDBLite consensus disorder prediction 163 186 - -
Pral1787g00001 723 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 574 688 - -
Pral1787g00001 723 Pfam Salt stress response/antifungal 35 128 IPR002902 -
Pral1787g00001 723 Pfam Salt stress response/antifungal 302 395 IPR002902 -
Pral1787g00001 723 Pfam Salt stress response/antifungal 185 273 IPR002902 -
Pral1787g00001 723 Pfam Salt stress response/antifungal 419 514 IPR002902 -
Pral1787g00001 723 ProSiteProfiles Protein kinase domain profile. 613 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1787g00001 723 ProSiteProfiles Gnk2-homologous domain profile. 29 131 IPR002902 -
Pral1787g00001 723 Coils Coil 308 332 - -
Pral1787g00001 723 Gene3D - 174 277 IPR038408 -
Pral1787g00001 723 Gene3D - 414 516 IPR038408 -
Pral1787g00001 723 Gene3D - 294 398 IPR038408 -
Pral1787g00001 723 Gene3D - 28 131 IPR038408 -
Pral1787g00001 723 SUPERFAMILY Protein kinase-like (PK-like) 592 703 IPR011009 -
Pral1787g00001 723 MobiDBLite consensus disorder prediction 527 546 - -
Pral1787g00001 723 Gene3D Phosphorylase Kinase; domain 1 574 688 - -
Pral1787g00001 723 ProSiteProfiles Gnk2-homologous domain profile. 293 398 IPR002902 -
Pral1787g00001 723 ProSiteProfiles Gnk2-homologous domain profile. 404 516 IPR002902 -
Pral1787g00001 723 ProSitePatterns Protein kinases ATP-binding region signature. 619 641 IPR017441 GO:0005524
Pral1787g00001 723 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 299 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1787g00001 Pral-Chr1787 12841 18325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1787g00001 301 699 Receptor kinase-like Gene Family AT4G05200 40.887 3.05e-88 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral1787g00001 PK_Tyr_Ser-Thr 3.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1787g00001 - - pcin:129286968 527.709