Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral1786g00019 | ATGGGATCAGAAGCTCCCGCTATGGCAGCCGAGGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCTGGTAAAAAGAACCAAGGGAAAATTCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATCTGAATGATCTCTTTGTCGATCTTGCCAATGCTCTTGAACTAGGTCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAAGCTGCTAAGGGACCTGCTCGGTCAGATTGAGGCCCTTAAGAAGGAGAATGTGTCTCTGCTGTCTGAATCACATTACGTTACCATGGAGAAGAATGAGCTGCAGGAGGAAAATTCTGATCTAGAAACACAAATAGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCACAATCTAAACCTGACCTAAATGCACCTCCTCCAACAGAAGAACTTGAGCCACCAGAGCAAACAATTTTTCCTAGAGAGTGTCTCCAATTGCCTACCGTTGATCCTACATTGCAACGAGGACCCGCGGTAGTAGTTGTCCCCTTTCGTCCCCAGCTTCAACCTTCTTTTCCCACCCCAAACATCACTGAGCTCACTTCAAACTCCATTGTTAGTAAACCTCATGCCAGGTATCCAACCCCTGCAGACTCATGGCCATCGCAGTTGCTTGGAGAGCAGCCAACATCAAGCTAA | 699 | 0.4607 | MGSEAPAMAAEEVNMLEGTSKTSSCPGKKNQGKIPKRIHKAEREKMKREHLNDLFVDLANALELGQQNNGKASILCEATKLLRDLLGQIEALKKENVSLLSESHYVTMEKNELQEENSDLETQIEKLQGEIEARVAQSKPDLNAPPPTEELEPPEQTIFPRECLQLPTVDPTLQRGPAVVVVPFRPQLQPSFPTPNITELTSNSIVSKPHARYPTPADSWPSQLLGEQPTSS | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral1786g00019 | 232 | Gene3D | - | 33 | 111 | IPR036638 | GO:0046983 | |
| Pral1786g00019 | 232 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 35 | 85 | IPR011598 | GO:0046983 | |
| Pral1786g00019 | 232 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
| Pral1786g00019 | 232 | Coils | Coil | 110 | 137 | - | - | |
| Pral1786g00019 | 232 | MobiDBLite | consensus disorder prediction | 187 | 232 | - | - | |
| Pral1786g00019 | 232 | MobiDBLite | consensus disorder prediction | 191 | 209 | - | - | |
| Pral1786g00019 | 232 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 35 | 101 | IPR036638 | GO:0046983 | |
| Pral1786g00019 | 232 | Coils | Coil | 82 | 102 | - | - | |
| Pral1786g00019 | 232 | PANTHER | TRANSCRIPTION FACTOR BHLH47 | 1 | 231 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral1786g00019 | Pral-Chr1786 | 109467 | 111655 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral1786g00019 | 1 | 228 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT3G47640 | 48.594 | 4.29e-66 | 202 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral1786g00019 | - | - | mtr:11438092 | 315.849 |