Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1786g00018 ATGAGGAATTCGATTTGCTGTTGCTGGCATCTTGGCGGTAGAAAATACGGAATTTGTGTTGTACTGGAAGAATTGTGTGAAGGCATCTCTGGTTTTTGTTACTTCTTTATGGGATCAGAAGCTCCCGCTATGGCAGCCGAGGAAGTCAATATGTTAGAAGGAACATCAAAAACCAGTTCTTGTCCTGGTAAAAAGAACCAAGGGAAAATTCCCAAAAGAATTCACAAGGCTGAAAGGGAGAAAATGAAGCGTGAGCATCTGAATGATCTCTTTGTCGATCTTGCCAATGCTCTTGAACTAGGTCAGCAAAACAATGGAAAGGCGTCCATATTGTGTGAAGCCACTAAGCTGCTAAGGGACCTGCTCGGTCAGATTGAGGCCCTTAAGAAGGAGAATGTGTCTCTGCTGTCTGAATCACATTACGTTACCATGGAGAAGAATGAGCTGCAGGAGGAAAATTCTGATCTAGAAACACAAATAGAGAAACTTCAAGGCGAGATAGAAGCACGAGTAGCACAATCTAAACCTGACCTAAATGCACCTCCTCCAACAGAAGAACTTGAGCCACCAGAGCAAACAATTTTTCCTAGAGAGTGTCTCCAATTGCCTACCGTTGATCCTACATTGCAACGAGGACCCGCGGTAGTAGTTGTCCCCTTTCGTCCCCAGCTTCAACCTTCTTTTCCCACCCCAAACATCACTGAGCTCACTTCAAACTCCATTGTTAGTAAACCTCATGCCAGGTATCCAACCCCTGCAGACTCATGGCCATCGCAGTTGCTTGGAGAGCAGCCAACATCAAGCTAA 807 0.4523 MRNSICCCWHLGGRKYGICVVLEELCEGISGFCYFFMGSEAPAMAAEEVNMLEGTSKTSSCPGKKNQGKIPKRIHKAEREKMKREHLNDLFVDLANALELGQQNNGKASILCEATKLLRDLLGQIEALKKENVSLLSESHYVTMEKNELQEENSDLETQIEKLQGEIEARVAQSKPDLNAPPPTEELEPPEQTIFPRECLQLPTVDPTLQRGPAVVVVPFRPQLQPSFPTPNITELTSNSIVSKPHARYPTPADSWPSQLLGEQPTSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1786g00018 268 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 136 IPR036638 GO:0046983
Pral1786g00018 268 MobiDBLite consensus disorder prediction 227 245 - -
Pral1786g00018 268 PANTHER TRANSCRIPTION FACTOR BHLH47 37 267 - -
Pral1786g00018 268 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 121 IPR011598 GO:0046983
Pral1786g00018 268 Coils Coil 146 173 - -
Pral1786g00018 268 Gene3D - 69 146 IPR036638 GO:0046983
Pral1786g00018 268 Coils Coil 118 138 - -
Pral1786g00018 268 CDD bHLH_AtILR3_like 76 149 - -
Pral1786g00018 268 MobiDBLite consensus disorder prediction 224 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1786g00018 Pral-Chr1786 109467 111889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1786g00018 37 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G47640 48.594 8.97e-65 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1786g00018 - - mtr:11438092 315.849