LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1786g00005	ATGGGGAAGACACCGGGAAAATGGATCAAAACTGTGCTATTTGGGAAAAAGTCATCCAAATCCAATATTTCAAAAGCAAGAGAGAAACTTGTTAAACAGAAAGAAGCGCCTATTGCTTCCAAGGCATCAGAAACTGAGTTCTCTTTTGATCCAACTCCCACTACTTTTGCTAGAAGTGAGAGGGATCCAGAAGTGGAAAATAATGGATCAGAAAATCTTTTGCTGCAGAATCAAGCAGATATTGCAGGATCTGATCATCAAGATGCCCCTCCTGATCCAGAGAGAATTATGCAGGATGAATCTGCAACAAAGGTGCAGGCTACTTTACCTCCTGATCTAGAGAAAATTAAGCAGGAGAAAGCTTCAATGAAGATGCAGGCTACTTCACCGCCTGATCTAGACAAAATTAAGCAGGAGGAATCTGCAATTAAGATGCAGGCTACTTTACCTCCCGATCTAGAGAAAATTAAGCAGGAGAAAGCTTCAATGAAGATGCAGGCTACTTCACTGCCTGATCTAGACAAAATTAAGCAGGAGGAATCTGCAATTAAGATGCAGGCTACTTTACCTCCTGATCTAGACAAAATTAAGCGGGAGGAAGCTGTAATGAAGGTGCAAGCTACTTTCAGGGGTTATTTGGCTCGCAGGGCTTTCAGGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTGTCCGAGGGCACTTGGTTAGGAGGCAAGCTATTTCTACTTTATGTTGCATGTATGGGATTATCAAGTTACAAGCACTTGTTCGTGGTCGAAGAGTTAGGCAGTCTGATGTTGGGCATGAAATGCATGGGAAATGCAATCTTGTGAAGCCTCTGGTTGACAAGTGCGGCAACTCAGTTGGCTTAACCGCAAAAATTGCAAATACGTCAGCGAATGTTTTTATCCACAAGCTTCTTGCTTCATCAACTGCAAAAACTGCTTCGCGTCTTCAATACGCATCTGGGGATCAAAATGTAGTCCTAGGTTGGTTGGAGCGCTGGTCAGCATCTCACTTTTGGAAACCAGTTCCCAAACCCAAGAAACTCATAGACTCTAAATCTCAGAGAAAGCTGGGTAATATTTCAAATGGAGATGCTCAGATGAGCAAACCAAAACGTGCTAACTGGAAGATTCCTTCTACAAGTTTAGACTTGGTCTTAATGCGAGAAAATTCTGATTTTGAGAAGCCAAAAAGAAACCTGAGAAAAGTTTCAAGCAAGCCCACAGATCCAGTGCAGGAAAGTTCAGAAAATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTAGTAACCCTGTTGTAGAGAATTCTGCTCAGTCAGAAGTTGAATCAGAGACTGCGAAGCAGCATCCGGAAGAGGAAGCAGTTACCTCAGGCTATTGTGTTTCAGAAGATGGGATCAAAAGCTGTTCCAATGAGAAGATAAAAATGGACACAACATTGGCCATGTCCAATGAGCCTAATGGAGAAGTTACACTTAGAATTTCAGTTGGCAAGGAGGCGTCTAACATTCCTGATACTCAAGTGCCCATCAATTCGGCACCCTTGAGAGAGAATACAAGTAGATGGAAAAACAATTCTGGTGAAGAAGATGCCAAAGTGCTAAAAGATCCACACGAGAGTTGTAATGATGAAAATTCTCCCCTAATAAATGGGCATTTGAGTCTTAAGGAAGATTCAACCAGAAATGAAAACCAGAAAGCCAGTGGGAAATCCCCAGCTCTAGCTAAGCAGGAACCTGTGGAGGATGGTTTACAGAATAGCCCAACTCCCACTTTACCAAGTTATATGGCGGCTACTGAATCTGCCAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATGGTGGTGAGAGAAGCAACCTTACCAGGCGGCATTCTCTGCCATCTTCAAATAACAGTAAAATTAGTTCGCATTCGCCAAGAACACACAGACCAGCTCAAGCAGGAGGCAAAGTGGGACACAGGACTGACAGAGCAACAGGTTCTTCCAGAAGTGCTAATGGAAAGTTAACTCAAGCAGAGTGGAGAAGGTGA	2055	0.4316	MGKTPGKWIKTVLFGKKSSKSNISKAREKLVKQKEAPIASKASETEFSFDPTPTTFARSERDPEVENNGSENLLLQNQADIAGSDHQDAPPDPERIMQDESATKVQATLPPDLEKIKQEKASMKMQATSPPDLDKIKQEESAIKMQATLPPDLEKIKQEKASMKMQATSLPDLDKIKQEESAIKMQATLPPDLDKIKREEAVMKVQATFRGYLARRAFRTLKGIIRLQALVRGHLVRRQAISTLCCMYGIIKLQALVRGRRVRQSDVGHEMHGKCNLVKPLVDKCGNSVGLTAKIANTSANVFIHKLLASSTAKTASRLQYASGDQNVVLGWLERWSASHFWKPVPKPKKLIDSKSQRKLGNISNGDAQMSKPKRANWKIPSTSLDLVLMRENSDFEKPKRNLRKVSSKPTDPVQESSENEFEKVKRNLRKVSNPVVENSAQSEVESETAKQHPEEEAVTSGYCVSEDGIKSCSNEKIKMDTTLAMSNEPNGEVTLRISVGKEASNIPDTQVPINSAPLRENTSRWKNNSGEEDAKVLKDPHESCNDENSPLINGHLSLKEDSTRNENQKASGKSPALAKQEPVEDGLQNSPTPTLPSYMAATESAKAKLRAQGSPRLGQDGGERSNLTRRHSLPSSNNSKISSHSPRTHRPAQAGGKVGHRTDRATGSSRSANGKLTQAEWRR	684

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1786g00005	684	SMART	iq_5	220	241	IPR000048	GO:0005515
	Pral1786g00005	684	SMART	iq_5	197	219	IPR000048	GO:0005515
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	526	546	-	-
	Pral1786g00005	684	ProSiteProfiles	IQ motif profile.	222	244	IPR000048	GO:0005515
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	507	525	-	-
	Pral1786g00005	684	Gene3D	-	196	243	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	69	83	-	-
	Pral1786g00005	684	Pfam	Protein of unknown function (DUF4005)	575	660	IPR025064	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	507	684	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	433	447	-	-
	Pral1786g00005	684	PANTHER	IQ-DOMAIN 5-RELATED	1	642	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	586	600	-	-
	Pral1786g00005	684	ProSiteProfiles	IQ motif profile.	198	226	IPR000048	GO:0005515
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	398	461	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	629	650	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	416	431	-	-
	Pral1786g00005	684	MobiDBLite	consensus disorder prediction	22	111	-	-
	Pral1786g00005	684	Pfam	IQ calmodulin-binding motif	222	239	IPR000048	GO:0005515
	Pral1786g00005	684	Pfam	IQ calmodulin-binding motif	200	219	IPR000048	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1786g00005	Pral-Chr1786	33204	37675	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1786g00005	192	684	IQD Protein Family	AT1G74690	42.406	1.88e-103	326

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1786g00005	-		-	pcin:129309270	871.307