Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1785g00004 ATGTCAGCGACGCCGTCTCCCGGTGCTGCGCCGGCACCCAAGTCGCCGCCGGCTCCGGCGACCAACAATACTTCCCCTCCACCCAGCCCTTCAGCTCCTCCACCGTCCACACCAGCATCACCTCCGCCAGCCACGCCCTCTGCTCCGCCGCCGGCGACTCCTTCATCTCCTCCTCCAGCTCCGGCTACACCTTCTCTGAGCCCTCCTTCTCCTTCCCCTCCATCATCAACCTCACCACCACCAGAATCTTCAGCGTCGCCTCCTCCACCGTCCAGTACCAACAGTCCACCGAGTCCGGCGAGTCACAGCCCGCCGTCTCCTCCATCGAGCTCAAATTCGCCGTCTCCTCCGTCGAGCTCAAATTCGCCTTCGACTCCGAATCGAAGTCCGCCGCCACCGTCTTCGTCGAAGTCGTCGCCGTCTCCACCTTCGTCATCGTCCTCATCGAGTAATATATCAACTGGGGTTGTTGTCGCCATTGCCGTGGGGGCTGTGGCGGTTCTTCTTGTGTTGAGTATTCTCTGCATTTGCTGTAGGAAGAAGAAGAGAAGACGTGATGAGGAATACTATGCGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCGTCAGTGGCAACACAATGCTCCCCCTCCTTCAGATCACGTGGTCTCAGTAATGCCAAAGCCATCGCCTCCACCACCACCAGTTGCATCACGGCCTGCCCACTCACCCGTTTATGCTCCTCCACCGCCACCGCCTGCTTTCATAAGCAGCAGTGGTGGCTCTGGCTCTAACTATTCAGGCAGTGAAAACATTCTTCCACCTCCTTCTCCAGGCTTTGGACTGGGTTTCTCAAAGAGTACATTTACATATGAGGAGCTGGCCCGGGCAACAGATGGCTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGCTATGTGCACAGAGGCATTCTTCCTAATGGAAAGGAAGTGGCTGTGAAGCAACTTAAGGCTGGAAGTGGGCAGGGGGAGCGTGAATTTCAAGCTGAAGTTGAGATTATTAGTAGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAATTTGTTCCCAACAATACATTGGAGTTTCACTTGCACGGAAAAGGGAGGCCTACCATGGACTGGCCCACAAGACTGAAAATTGCTTTAGGATCAGCAAAAGGATTGGCGTATCTTCATGAGGACTGTCATCCTAAGATCATCCACCGTGATATCAAAGCTGCTAACATTCTTCTGGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTTGCAAAGTTTACGTCTGATATTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCACTGACAAATCAGATGTTTTCTCCTTTGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTTGATTCAGGGCATACATTTATGGAGGATGGTTTGGTAGACTGGGCAAGGCCTGTGCTCGCTCGTGCTTTAGAAGATGAAAATTTTGACTCCGTGGTTGATCCAAGACTCCAACATGAATATGACCCCAATGAGATGGCTCGTATGGTGGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAGCGCAGGCCAAGGATGAGCCAGGTTGTTCGTGCTCTGGAAGGAGATGTATCTCTAGCGGACCTTAATGAAGGAATTAAGCCCGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCAGATTATGACACAGTTCAATACAAGGAGGACATGAAAAAGTTCAGAAAAATGGCATTTGGTGGAGGAACCAATGAGTATGGTGCCAGTGGCGAGTACAGCGGACCACCTACGAGTGAGTATGGCTTGTATCCTTCTGGTTCAAGCAGTGAAGGCCAGAGTCGCCAGACCACAAGGGAAATGGAGCTGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAG 2034 0.5143 MSATPSPGAAPAPKSPPAPATNNTSPPPSPSAPPPSTPASPPPATPSAPPPATPSSPPPAPATPSLSPPSPSPPSSTSPPPESSASPPPPSSTNSPPSPASHSPPSPPSSSNSPSPPSSSNSPSTPNRSPPPPSSSKSSPSPPSSSSSSSNISTGVVVAIAVGAVAVLLVLSILCICCRKKKRRRDEEYYAPPPVPPQGPKVDPYGGPQRQWQHNAPPPSDHVVSVMPKPSPPPPPVASRPAHSPVYAPPPPPPAFISSSGGSGSNYSGSENILPPPSPGFGLGFSKSTFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDINTHVSTRVMGTFGYLAPEYASSGKLTDKSDVFSFGVMLLELITGRRPVDSGHTFMEDGLVDWARPVLARALEDENFDSVVDPRLQHEYDPNEMARMVACAAACIRHSAKRRPRMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTVQYKEDMKKFRKMAFGGGTNEYGASGEYSGPPTSEYGLYPSGSSSEGQSRQTTREMELRKMKNSQGFSGSS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1785g00004 677 FunFam Proline-rich receptor-like protein kinase PERK1 378 586 - -
Pral1785g00004 677 SUPERFAMILY Protein kinase-like (PK-like) 283 575 IPR011009 -
Pral1785g00004 677 FunFam proline-rich receptor-like protein kinase PERK1 280 377 - -
Pral1785g00004 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Pral1785g00004 677 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1785g00004 677 MobiDBLite consensus disorder prediction 223 257 - -
Pral1785g00004 677 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 163 643 IPR047117 -
Pral1785g00004 677 ProSiteProfiles Protein kinase domain profile. 302 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1785g00004 677 CDD STKc_IRAK 308 577 - -
Pral1785g00004 677 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Pral1785g00004 677 MobiDBLite consensus disorder prediction 642 657 - -
Pral1785g00004 677 Gene3D Phosphorylase Kinase; domain 1 283 377 - -
Pral1785g00004 677 MobiDBLite consensus disorder prediction 1 152 - -
Pral1785g00004 677 MobiDBLite consensus disorder prediction 258 273 - -
Pral1785g00004 677 Gene3D Transferase(Phosphotransferase) domain 1 378 585 - -
Pral1785g00004 677 MobiDBLite consensus disorder prediction 9 139 - -
Pral1785g00004 677 Pfam Protein tyrosine and serine/threonine kinase 307 575 IPR001245 GO:0004672|GO:0006468
Pral1785g00004 677 MobiDBLite consensus disorder prediction 185 275 - -
Pral1785g00004 677 PRINTS Proline rich extensin signature 43 59 - -
Pral1785g00004 677 PRINTS Proline rich extensin signature 4 16 - -
Pral1785g00004 677 PRINTS Proline rich extensin signature 61 78 - -
Pral1785g00004 677 PRINTS Proline rich extensin signature 22 43 - -
Pral1785g00004 677 MobiDBLite consensus disorder prediction 629 677 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1785g00004 Pral-Chr1785 29452 33198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1785g00004 100 660 Trihelix Transcription Factor Family AT1G70460 48.841 2.11e-170 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral1785g00004 PK_Tyr_Ser-Thr 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1785g00004 - - gmx:100781944 806.594