Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1784g00010 ATGACGACGCTCTTCTCTTCCTTTTCCGCCACCGCGAAAACGTTGATTTCCATGGCCACCCCTGTCGTCGCGATTGCGATGGTGGCTCGAAACCTCTTCGCCTGCGACATTATTCAAGATATTTTCTTCAGTAGTGTCCGAGGATTACTCAATCGCTTCTCTTCTCAAATCACCATGGTGATCACCGAGGCCGATGGCCTCGTGAATAACCAAATCTACGATGCCGTCCGTACGTATTTGGGCAGAAAAATCTCCCCCTCCACTCGCAGAATCAAAGTTACCAATCCTGATCCTGAACAGAGCTTCGAGATCATCATGGAACGCGACGAGATCATCTTCGTGGACGTCTTCAGTAGCGTCAAATTTAAATGGGTCTTTCAGGTTGAGTCGGAAAATTCCAACAATCCGAGGGACCTGAATTCGATGATGGTGCGATCATTGGAGCTGAGTTTCCACAAGAAATACAGAGAATTGGTATTAACGTCGTACCTTCCCTTCATTATAGGAGAAGCGGAATTTATGAAGCAAGAAGCGACGGCTCCGAGAATCTTTGCAGTGGATTTCCTTAGGTTAGATCTGCGTCTAAACGACGTATGGATGCCGGCAAAGATAGAGCATCCAGTGACATTTGAAACCCTGGCATTGGAGCCGGACATGAAGAAATTCGTTCAGGAGGATCTGGAGAGGTTTGTCAGAAGGAAAGAATATTACAGGAAGGTAGGGAAGCCATGGAAGAGAGGGTATTTGCTGTCAGGGCCCCCCGGAACAGGGAAATCAAGTTTGATTGCAGCCATGGCGAATTACTTGCATTTTGATATATACGATTTGGAGTTCACGAGATTTCTAACATCATGCGATCGTGAGCTCCAAAAGTTACTGATGAATATGGCGAAAAGATGCATTCTCGCTGTGGAGGACATTGACTGCACCATTGAATACCAGCATCGCATGGCTGCTTTATGCTTCCCAGAACCACCCCTCCAGACAATGCCGATAGTGCCAATGCTATTGAACTTCCTTGATGGTGTGTGGTCAAGCTGCGGGGACGAGAGGATTATAGTCTTCACAACCAATCACAAAGAGAAGCTTGACCCAGCATTCTTGCGTCCGGGTCGTATGGACGTTCACATCCACATGTCATTTTGCACTCCATCCATGTTCAGGCAGCTTACTTTTAATTACCTTCAACTTCATCACCATCCTCTTTTTTCACAAATTGAAGAAGCCATTCTTGCCACTCATATCACTCCTGCTGAAGTGGCTGGGCAGCTCTTGAAGATAAAGAGTAATAATAGTAATAGTAATAACAGTAGTGATGACCATCACTTCTCTGTTATTCTTCAAGACCTTCGACAGTTTCTTGTACAAAAAAAGATGGAGAATGATAAAGAGATTGAGGCTAAAGAGAGGGAAACATAA 1419 0.4531 MTTLFSSFSATAKTLISMATPVVAIAMVARNLFACDIIQDIFFSSVRGLLNRFSSQITMVITEADGLVNNQIYDAVRTYLGRKISPSTRRIKVTNPDPEQSFEIIMERDEIIFVDVFSSVKFKWVFQVESENSNNPRDLNSMMVRSLELSFHKKYRELVLTSYLPFIIGEAEFMKQEATAPRIFAVDFLRLDLRLNDVWMPAKIEHPVTFETLALEPDMKKFVQEDLERFVRRKEYYRKVGKPWKRGYLLSGPPGTGKSSLIAAMANYLHFDIYDLEFTRFLTSCDRELQKLLMNMAKRCILAVEDIDCTIEYQHRMAALCFPEPPLQTMPIVPMLLNFLDGVWSSCGDERIIVFTTNHKEKLDPAFLRPGRMDVHIHMSFCTPSMFRQLTFNYLQLHHHPLFSQIEEAILATHITPAEVAGQLLKIKSNNSNSNNSSDDHHFSVILQDLRQFLVQKKMENDKEIEAKERET 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1784g00010 472 Gene3D - 198 377 IPR027417 -
Pral1784g00010 472 Gene3D - 378 450 - -
Pral1784g00010 472 PANTHER BCS1 AAA-TYPE ATPASE 20 462 - -
Pral1784g00010 472 Pfam ATPase family associated with various cellular activities (AAA) 249 379 IPR003959 GO:0005524|GO:0016887
Pral1784g00010 472 Pfam Domain associated at C-terminal with AAA 39 126 IPR025753 -
Pral1784g00010 472 SMART AAA_5 244 383 IPR003593 GO:0016887
Pral1784g00010 472 ProSitePatterns AAA-protein family signature. 351 369 IPR003960 GO:0005524|GO:0016887
Pral1784g00010 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 426 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1784g00010 Pral-Chr1784 143525 146325 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1784g00010 246 414 Calmodulin-binding Proteins AT3G56690 26.136 8.26e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1784g00010 - K08900 cave:132170735 489.96