Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1784g00006 ATGCCAAGCCGATCAACGGGAACCATAACTCAAGACTGGGAACCGGTGGTTCTGCACAAGAACAAACCCAAGACCCAGGACCTGCGCAATCCGAAGGCCGTGAACCAGGCACTCCGGTCAGGAGCTGAAGTCCAGACGATCAAGAAGTTCGACGCGGGTTCGAATAAAAAGAATGCTCCGGTCGTCAACGCGAGGAAGCTGGATGAAGAAACCGAGCCGGCTGCTCTGCAGAAGTTAAGGACAGAGGTGAGGACAGCTATACAGAAGGCTAGGTTGGAGAAGAAGATGAGCCAGGCGGATCTTGCGAAGCAGATCAACGAGCGGCCACAGGTGGTGCAGGAGTACGAGAACGGAAAAGCGGTTCCGAATCAGGCCGTGCTGGCGAAGATGGAAAGAGTTCTGGGCGTGAAACTCAGGGGAAAGACAGGCAGCAAGTGA 438 0.5502 MPSRSTGTITQDWEPVVLHKNKPKTQDLRNPKAVNQALRSGAEVQTIKKFDAGSNKKNAPVVNARKLDEETEPAALQKLRTEVRTAIQKARLEKKMSQADLAKQINERPQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKTGSK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1784g00006 145 Coils Coil 87 107 - -
Pral1784g00006 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 142 - -
Pral1784g00006 145 SMART mbf_short4 86 141 IPR001387 -
Pral1784g00006 145 Pfam Helix-turn-helix 87 138 IPR001387 -
Pral1784g00006 145 CDD HTH_XRE 86 138 IPR001387 -
Pral1784g00006 145 Gene3D - 72 145 IPR010982 GO:0003677
Pral1784g00006 145 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Pral1784g00006 145 Pfam Multiprotein bridging factor 1 11 78 IPR013729 -
Pral1784g00006 145 FunFam Multiprotein bridging factor 1 71 144 - -
Pral1784g00006 145 SUPERFAMILY lambda repressor-like DNA-binding domains 82 138 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1784g00006 Pral-Chr1784 61112 61763 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Pral1784g00006 MBF1 5.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1784g00006 K03627 - qsa:O6P43_004045 236.113