Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1783g00001 GTCCACCAACCTGTTCTTACCTACCCTGGAGCTTACAGAAGAGTTACAGTAGAGCTAAAGATTCACCATCTGGCTGTAGATGCTCTTCTAAAAAGCAACCAAGTCAATGAGTTGGAAGGAGGTGCTTTGTTAGGGTTTGATCATGACATAAACTCTGGACCATTTGCCATAAATGATCAGAATGGCATTGATGAGGCCACTTCATGTGCACGTGCTTTTCGAGTCCTAAAGCAGTTAATCCAACGGTGCCTTGCAGATGCAGTTACATCTGGAAATGCATATGCTGATGCAATATTGCAACATCTATATCGATGGCTATGCAGCTCTTCACCAGCTCCTTCACAAGGAAAACATGATCTGCCTGCAGCCAAAGCTTACTGTGATAGTTTGTTGCGAACTCTGCAGTCTAGAGATCTATTTGAATGGATTGAACTTGAACCGCTTCAGTTCTGGAACTCATTGCTATTCATGGATCAGTATAACTATGGTGGAATACCAGCAAAATCTGATGATGCGATTAATGACGAATCTCAAGTTGACATTATATCAAGTTGGAACATTGCCGAATACTTGCCAAAGAAAATCCAGGATCACTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGAACTATGCACAAAGACAAGCTGCAATACCGGCTTCATCACAAAGTGGCGACTCCTGCACCCCATCAATCACTATTGGAGCTGCAGAGAAATTTGAATCACATGTGACGGAATATATTAAAGGACAGATCAGCTCTTACTTCACAGACAAGCTTCTGGGAATTGTTGGCGATATTATGCATCATATGAAGGAGATAAGACTAGAAAAAGACCAGAATGTATCATCTGGCAATCCTCAACTTGCGGCTGATTTCCACAAAGGGGACGCAGCCTTGGAATTTATCAAGCATGTCTGTGCCGTCCTCGCCCTGGACCAGAGTGTGCAGCATGACGTTCTGGTCATGAGAAAGAATCTGTTGAGATTTGTTCGGGTCAGGGAGTTTGCACCAGAAGCTGAGTTTCGTGATCCGAGTCATTCATTCATATTACCCAATGTCATCTGCAGCTACTGCAATGATTGCAGAGATTTGGATTTGTGCCGTGACTCAGCTTTATTAAGTCAGGAGTGGCATTGTGGCGTGCCGCAGTGTGGGCAGCCATATGATCGTGAGGTGATGGAAAATGCACTTCTTCAGATTGTACGACAGAGAGAACGGCTATACCACTTGCAAGATCTGGTGTGCGTCAGATGTTACCAGGTTAAAGCTGCTCATTTAGCTGAGCAATGTGCTTGTGCGGGATCATACAAGTGCAAGGAAGATAGAACTGAATTTCGCAATAAGATGCAGGTTTTCTACAACATAGCTGTTCGCCAAAAATTCCAGCTCCTTCAGGAATGCACCTCATGGATTCTAGAGTTGAGATAG 1437 0.4363 VHQPVLTYPGAYRRVTVELKIHHLAVDALLKSNQVNELEGGALLGFDHDINSGPFAINDQNGIDEATSCARAFRVLKQLIQRCLADAVTSGNAYADAILQHLYRWLCSSSPAPSQGKHDLPAAKAYCDSLLRTLQSRDLFEWIELEPLQFWNSLLFMDQYNYGGIPAKSDDAINDESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYAQRQAAIPASSQSGDSCTPSITIGAAEKFESHVTEYIKGQISSYFTDKLLGIVGDIMHHMKEIRLEKDQNVSSGNPQLAADFHKGDAALEFIKHVCAVLALDQSVQHDVLVMRKNLLRFVRVREFAPEAEFRDPSHSFILPNVICSYCNDCRDLDLCRDSALLSQEWHCGVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCVRCYQVKAAHLAEQCACAGSYKCKEDRTEFRNKMQVFYNIAVRQKFQLLQECTSWILELR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1783g00001 478 Pfam Domain of unknown function (DUF1744) 116 165 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pral1783g00001 478 Pfam Domain of unknown function (DUF1744) 2 110 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Pral1783g00001 478 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 2 110 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Pral1783g00001 478 SMART DUF1744_2 1 165 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1783g00001 Pral-Chr1783 696 4527 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1783g00001 6 475 Core DNA Replication Machinery Family AT2G27120 47.656 4.08e-146 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1783g00001 K02324 - qsa:O6P43_028503 762.296