Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1782g00010 ATGCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAGGAAAACGATATCATGGCCATGGAAAGCAAATGAGCGGGATGGGTCAGAGGGAAGGAACGTCCGTGTTGGTTGGCCGTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGGAAGCCTCCTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGACCTGTTACTAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTAATTATGTCCTTCAGACAAGAGGTATCTGTTATGAAGAGACTTAGGCATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACTGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGTCCATATGGCTTTAGATATTGCTCGGGGTGTAAACTATCTTCATCATTGTAGCCCACCTATCATTCATCGAGATTTGAAATCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCGCGCCTCAAGCATGAAACATATCTCACAACAAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCATCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGATACTTGCAGGTGA 996 0.4498 MHKVLTSKAEAWIQRKTISWPWKANERDGSEGRNVRVGWPWLQNDQENEPAQRKPPSSCVRPESQAGEGNRPVTNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQDTCR 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1782g00010 331 FunFam PAS domain-containing protein tyrosine kinase 115 199 - -
Pral1782g00010 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pral1782g00010 331 PRINTS Tyrosine kinase catalytic domain signature 282 292 IPR001245 GO:0004672|GO:0006468
Pral1782g00010 331 PRINTS Tyrosine kinase catalytic domain signature 196 209 IPR001245 GO:0004672|GO:0006468
Pral1782g00010 331 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672|GO:0006468
Pral1782g00010 331 PRINTS Tyrosine kinase catalytic domain signature 235 253 IPR001245 GO:0004672|GO:0006468
Pral1782g00010 331 MobiDBLite consensus disorder prediction 40 82 - -
Pral1782g00010 331 SUPERFAMILY Protein kinase-like (PK-like) 111 327 IPR011009 -
Pral1782g00010 331 FunFam PAS domain-containing protein tyrosine kinase family protein 200 330 - -
Pral1782g00010 331 CDD STKc_MAP3K-like 128 327 - -
Pral1782g00010 331 Pfam Protein tyrosine and serine/threonine kinase 122 324 IPR001245 GO:0004672|GO:0006468
Pral1782g00010 331 SMART serkin_6 122 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00010 331 Gene3D Phosphorylase Kinase; domain 1 115 199 - -
Pral1782g00010 331 ProSiteProfiles Protein kinase domain profile. 122 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00010 331 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 74 321 - -
Pral1782g00010 331 Gene3D Transferase(Phosphotransferase) domain 1 200 331 - -
Pral1782g00010 331 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1782g00010 Pral-Chr1782 39829 44065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1782g00010 3 327 MAP Kinase Kinase Kinase AT5G49470 75.767 1.64e-180 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1782g00010 PK_Tyr_Ser-Thr 1.7e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1782g00010 - - pop:7471103 561.222