Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1782g00009 ATGTGGAACTGTGTATCATGCTCTGTGGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTAATTATGTCCTTCAGACAAGAGGTATCTGTTATGAAGAGACTTAGGCATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACTGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGTCCATATGGCTTTAGATATTGCTCGGGGTGTAAACTATCTTCATCATTGTAGCCCACCTATCATTCATCGAGATTTGAAATCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCGCGCCTCAAGCATGAAACATATCTCACAACAAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCATCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTGATTGGAGCTGTTGGCTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTTGATCCCAAGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCCTGCCGGCCAACGTTTCAGGAACTGCTAGAAAGGCTTCGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCTGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAGTCCTAA 798 0.4536 MWNCVSCSVDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWAAIIESCWHSDPACRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1782g00009 265 SMART serkin_6 2 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00009 265 SUPERFAMILY Protein kinase-like (PK-like) 9 249 IPR011009 -
Pral1782g00009 265 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 245 - -
Pral1782g00009 265 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
Pral1782g00009 265 FunFam serine/threonine-protein kinase STY46-like 2 65 - -
Pral1782g00009 265 Pfam Protein tyrosine and serine/threonine kinase 8 239 IPR001245 GO:0004672|GO:0006468
Pral1782g00009 265 CDD STKc_MAP3K-like 10 239 - -
Pral1782g00009 265 Gene3D Transferase(Phosphotransferase) domain 1 65 265 - -
Pral1782g00009 265 PIRSF ILK 2 254 - -
Pral1782g00009 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 106 118 IPR008271 GO:0004672|GO:0006468
Pral1782g00009 265 FunFam PAS domain-containing protein tyrosine kinase family protein 65 256 - -
Pral1782g00009 265 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00009 265 PRINTS Tyrosine kinase catalytic domain signature 61 74 IPR001245 GO:0004672|GO:0006468
Pral1782g00009 265 PRINTS Tyrosine kinase catalytic domain signature 100 118 IPR001245 GO:0004672|GO:0006468
Pral1782g00009 265 PRINTS Tyrosine kinase catalytic domain signature 210 232 IPR001245 GO:0004672|GO:0006468
Pral1782g00009 265 PRINTS Tyrosine kinase catalytic domain signature 147 157 IPR001245 GO:0004672|GO:0006468
Pral1782g00009 265 PRINTS Tyrosine kinase catalytic domain signature 166 188 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1782g00009 Pral-Chr1782 37579 43682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1782g00009 10 261 MAP Kinase Kinase Kinase AT5G49470 84.921 4.77e-167 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1782g00009 PK_Tyr_Ser-Thr 1.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1782g00009 - - rcu:8258821 482.641