Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1782g00008 ATGCATAAAGTCTTAACTTCCAAGGCTGAAGCATGGATTCAAAGGAAAACGATATCATGGCCATGGAAAGCAAATGAGCGGGATGGGTCAGAGGGAAGGAACGTCCGTGTTGGTTGGCCGTGGTTGCAGAATGATCAAGAAAATGAGCCAGCTCAGCGGAAGCCTCCTTCTTCTTGTGTGAGGCCAGAAAGTCAGGCAGGAGAAGGTAATCGACCTGTTACTAATGAAGCATCAGGATCCTGGTCCTCCTTCAATGTTAACAGCACAAGTAGTGCAAGCAGCTGTGGGAGTGGCAGCAGTGCTGTCAATAATAAATTGGACATGGATACTGATTGTTTGGATTATGAAATCTTGTGGGAAGACCTGACAATTGGAGAACAAATTGGGCAAGGATCATGTGGAACTGTGTATCATGCTCTGTGGTATGGATCAGATGTTGCGGTCAAGGTATTCTCCAAGCAAGAATATTCAGATGATGTAATTATGTCCTTCAGACAAGAGGTATCTGTTATGAAGAGACTTAGGCATCCAAATGTCCTTCTGTTCATGGGGGCAGTAACTTCACCTCAACGTCTCTGCATTGTGACTGAGTTTCTCCCACGTGGAAGCTTGTTTCGCTTACTCCAGAGAAACACAGCCAAACTTGACTGGAGACGGCGTGTCCATATGGCTTTAGATATTGCTCGGGGTGTAAACTATCTTCATCATTGTAGCCCACCTATCATTCATCGAGATTTGAAATCTTCAAATCTTCTAGTTGACAAGAACTGGACTGTTAAGGTCGGTGATTTTGGCCTTTCGCGCCTCAAGCATGAAACATATCTCACAACAAAGACTGGAAAGGGCACGCCTCAATGGATGGCACCAGAAGTTCTTCGTAATGAGCCATCTGATGAGAAGTCTGATGTATACAGCTTTGGAGTGATATTGTGGGAACTTACAACTGAGAAGATCCCTTGGGAGAGTCTCAACTCAATGCAGGTGATTGGAGCTGTTGGCTTCATGAACCAGCGGCTAGAAATTCCAAAGGATGTTGATCCCAAGTGGGCTGCTATAATTGAGAGCTGCTGGCATAGTGATCCAGCCTGCCGGCCAACGTTTCAGGAACTGCTAGAAAGGCTTCGAGAGCTGCAAAGACGTTATGCCCTTCAATTTCAAGCTGCTCGTTCTGCTGGTGTTGAAAACACTCAAAAGGAGTCCTAA 1203 0.4564 MHKVLTSKAEAWIQRKTISWPWKANERDGSEGRNVRVGWPWLQNDQENEPAQRKPPSSCVRPESQAGEGNRPVTNEASGSWSSFNVNSTSSASSCGSGSSAVNNKLDMDTDCLDYEILWEDLTIGEQIGQGSCGTVYHALWYGSDVAVKVFSKQEYSDDVIMSFRQEVSVMKRLRHPNVLLFMGAVTSPQRLCIVTEFLPRGSLFRLLQRNTAKLDWRRRVHMALDIARGVNYLHHCSPPIIHRDLKSSNLLVDKNWTVKVGDFGLSRLKHETYLTTKTGKGTPQWMAPEVLRNEPSDEKSDVYSFGVILWELTTEKIPWESLNSMQVIGAVGFMNQRLEIPKDVDPKWAAIIESCWHSDPACRPTFQELLERLRELQRRYALQFQAARSAGVENTQKES 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1782g00008 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pral1782g00008 400 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 75 380 - -
Pral1782g00008 400 Gene3D Transferase(Phosphotransferase) domain 1 200 400 - -
Pral1782g00008 400 FunFam PAS domain-containing protein tyrosine kinase family protein 200 391 - -
Pral1782g00008 400 MobiDBLite consensus disorder prediction 40 82 - -
Pral1782g00008 400 FunFam PAS domain-containing protein tyrosine kinase 115 199 - -
Pral1782g00008 400 Gene3D Phosphorylase Kinase; domain 1 115 199 - -
Pral1782g00008 400 SUPERFAMILY Protein kinase-like (PK-like) 110 374 IPR011009 -
Pral1782g00008 400 PRINTS Tyrosine kinase catalytic domain signature 345 367 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 PRINTS Tyrosine kinase catalytic domain signature 196 209 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 PRINTS Tyrosine kinase catalytic domain signature 301 323 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 PRINTS Tyrosine kinase catalytic domain signature 282 292 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 PRINTS Tyrosine kinase catalytic domain signature 235 253 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 ProSiteProfiles Protein kinase domain profile. 122 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00008 400 Pfam Protein tyrosine and serine/threonine kinase 122 374 IPR001245 GO:0004672|GO:0006468
Pral1782g00008 400 SMART serkin_6 122 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1782g00008 400 CDD STKc_MAP3K-like 128 374 - -
Pral1782g00008 400 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1782g00008 Pral-Chr1782 37579 44065 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1782g00008 3 396 MAP Kinase Kinase Kinase AT5G49470 74.684 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pral1782g00008 PK_Tyr_Ser-Thr 1.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1782g00008 - - pop:7471103 676.396