Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1779g00005 ATGAGTTTCGTCTTCCGAGGGAGCAGAGGAGATGTGGAAAGTGGATTTTCAGAATATGTTCCTGAAAGAACCACGATGCGTGTCCATCCAGCCCGGCCAGTAAATAGCAATGCTCTGGCTTTTCTCATCACAGTTATCATGCTGTTTATGATATTGAATTCTCCCCAAATGTCACATTTTTTGATGTGGCTTATGCTGATTGTGTTTGTGATGGCCACAAGCCTGAGGATGTATGTAACTTGGCAACAGCTTCAAGCTCAAGCAAGGGCTCATGCCGCAGCAGCTGAATTACAACTTCACATGCCGCCGTCCATAGCAATTGCAGCTAGAGGACGCTTGCAAGGACTCAGACTTCAGCTTGCGCTTCTTGACCGTGAATTTGATGAGCTTGATTATGAGACACTGAGGACTCTGGAATCTGACACTGCTTCTACTACTACTTCAATGACTGATGAAGAGATAAATGCCTTACCTGTTCACACATACAAAGTTCCTGTCCCAACAAAGGATGGCTCAGCTGGGTTGGCTTCCTCTTCACGCGCAACCGAGGTTAGGCAAGATAACGGCGGGACCGAGGGAAATGCGAAGGGTCCAGAAGATGAGCTAACGTGTACTATATGTTTGGAACAAGTTAAGAGAGGGGAGCTAGTTCGTAGCTTGCCATGTTTGCATCAGTTTCACACGAACTGCATCGATCCATGGCTGCGACAGCAAGCAAAATGCCCTGTGTGTAAATTTAGAATGGGGTCTGGATGGCAGGGAAATAGTGGGGACAATGAGTCTGAAGGCGCAGATACTGTGTAG 804 0.4714 MSFVFRGSRGDVESGFSEYVPERTTMRVHPARPVNSNALAFLITVIMLFMILNSPQMSHFLMWLMLIVFVMATSLRMYVTWQQLQAQARAHAAAAELQLHMPPSIAIAARGRLQGLRLQLALLDREFDELDYETLRTLESDTASTTTSMTDEEINALPVHTYKVPVPTKDGSAGLASSSRATEVRQDNGGTEGNAKGPEDELTCTICLEQVKRGELVRSLPCLHQFHTNCIDPWLRQQAKCPVCKFRMGSGWQGNSGDNESEGADTV 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1779g00005 267 Pfam Ring finger domain 203 245 IPR001841 -
Pral1779g00005 267 SUPERFAMILY RING/U-box 199 248 - -
Pral1779g00005 267 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 181 250 IPR013083 -
Pral1779g00005 267 MobiDBLite consensus disorder prediction 168 199 - -
Pral1779g00005 267 MobiDBLite consensus disorder prediction 172 189 - -
Pral1779g00005 267 ProSiteProfiles Zinc finger RING-type profile. 204 245 IPR001841 -
Pral1779g00005 267 PANTHER TARGET OF ERK KINASE MPK-1 1 252 - -
Pral1779g00005 267 CDD RING-H2_PA-TM-RING 203 245 - -
Pral1779g00005 267 SMART ring_2 204 244 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1779g00005 Pral-Chr1779 19088 22514 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1779g00005 1 253 C3H Transcription Factor Family AT3G55530 67.300 2.67e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1779g00005 K16283 - gmx:100805406 385.185