Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1777g00003 ATGTCTTCGATCTTAACTGGAGCAGGTGGTGGAAGAACCTACGGGTTCGACTTAGATTTTGTGAAATCTCCATCTCCGTTGATCCGTCCTTCTCATACATCGTCATCTTCTACTTCTTCTGCTTCTTCAACAATATCTGAATCCAGCAATTCCCCTTTAACAATCTCGACCAGAAAATCTCGAGCTCCCCGAAAAAGACCGAATCAAACCTACAATGAAGCTGCTGCTTTGCTATCCACAGCCTATCCCAATCTCTTTTCCAACAAGAACCTCAAAAAACCAGGCCAATTCTGCAGACCTAATGATGCTGCTTTTCTGGATGAATCTGCAGAGGAACTGTTCTTGCCTTTCAGAGTCTTCGATGATTCTGCTGCCTCTTTCCTCCTTCAACAACAAATTCAGCACAAGCCTAGTTCTCCAATGGATCCCAAAATGGTGAATCTACAAGAAAAGTCGTGCCAGAGTCCCGGGGAGATTATCTCGCGAGTGAATTCGTTGGAATTGAACGATGATTGCGAAGAAGATTTCGATGCCGAATCCATTCTCGATGAGGAGATCGACGAGGGAATCGATAGCATCATTGGAAGCAGAGCTGAAGAAGATTCCAATGATGCATCCTGTCACGGCGAAGGGGGGAATAATTGGAGCGTGGATTCCTCAGGATTCGGATGTGGCGCAAAACTCGATTTCCGACTGGGGCTGGTGAAGGCTCTCCGGCGTGTCGATGACAGCAATTGGTGGAATTTCCCGGCGGTTGACATAGTGGAAATCTCGCCAAGAATCAACAAGCACACGTCGTCATTTGCTGCGCCGGCGGAAAAGGAGAAGAAGAAGAAGAAAACGTCGTCGTCGACGACGACGAAGAAAGTGGCGGAGAAGACGAAGATGAAATCACTGAGAGCAATTTCGATTCCGAAATCGAATGCCTCAAAACTGATGTTAAAACTGAACTACGACGACGTTTTGAGTGCTTGGTCCGACCGAGGGTCGCCGTTCACCAACGGACGTCGTGGCTCCGATTCACCTGGAAATAATGCCAATGCCCAAGAAGCCCATATAGATTTGCTGACAAATATGGGCGGAGTGAGGGAAGCCAGCGTGATGCGCTACAAAGAAAAGCGGCGGACGCGTCTCATCTCTAAGAAGATTAGATATCAAGTCAGAAAAGTCAACGCTGATCAACGGCCCAGAATGAAGGGGCGATTTGTGAGGAGGGCCAATCATAGCTCAAATCCAGATGGACGGTGA 1248 0.4784 MSSILTGAGGGRTYGFDLDFVKSPSPLIRPSHTSSSSTSSASSTISESSNSPLTISTRKSRAPRKRPNQTYNEAAALLSTAYPNLFSNKNLKKPGQFCRPNDAAFLDESAEELFLPFRVFDDSAASFLLQQQIQHKPSSPMDPKMVNLQEKSCQSPGEIISRVNSLELNDDCEEDFDAESILDEEIDEGIDSIIGSRAEEDSNDASCHGEGGNNWSVDSSGFGCGAKLDFRLGLVKALRRVDDSNWWNFPAVDIVEISPRINKHTSSFAAPAEKEKKKKKTSSSTTTKKVAEKTKMKSLRAISIPKSNASKLMLKLNYDDVLSAWSDRGSPFTNGRRGSDSPGNNANAQEAHIDLLTNMGGVREASVMRYKEKRRTRLISKKIRYQVRKVNADQRPRMKGRFVRRANHSSNPDGR 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1777g00003 415 MobiDBLite consensus disorder prediction 27 58 - -
Pral1777g00003 415 MobiDBLite consensus disorder prediction 392 415 - -
Pral1777g00003 415 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 32 408 - -
Pral1777g00003 415 MobiDBLite consensus disorder prediction 27 68 - -
Pral1777g00003 415 MobiDBLite consensus disorder prediction 268 292 - -
Pral1777g00003 415 ProSiteProfiles CCT domain profile. 363 405 IPR010402 GO:0005515
Pral1777g00003 415 Pfam CCT motif 363 405 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1777g00003 Pral-Chr1777 17466 22248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1777g00003 300 407 C2C2-CO-like Transcription Factor Family AT1G73870 44.000 8.30e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1777g00003 CCT 8.1e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1777g00003 - - qsa:O6P43_022368 419.853