Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1777g00002 ATGTCTTCGATCTTAACTGGAGCAGGTGGTGGAAGAACCTACGGGTTCGACTTAGATTTTGTGAAATCTCCATCTCCGTTGATCCGTCCTTCTCATACATCGTCATCTTCTACTTCTTCTGCTTCTTCAACAATATCTGAATCCAGCAATTCCCCTTTAACAATCTCGACCAGAAAATCTCGAGCTCCCCGAAAAAGACCGAATCAAACCTACAATGAAGCTGCTGCTTTGCTATCCACAGCCTATCCCAATCTCTTTTCCAACAAGAACCTCAAAAAACCAGGCCAATTCTGCAGACCTAATGATGCTGCTTTTCTGGATGAATCTGCAGAGGAACTGTTCTTGCCTTTCAGAGTCTTCGATGATTCTGCTGCCTCTTTCCTCCTTCAACAACAAATTCAGCACAAGCCTAGTTCTCCAATGGATCCCAAAATGGTGAATCTACAAGAAAAGTCGTGCCAGAGTCCCGGGGAGATTATCTCGCGAGTGAATTCGTTGGAATTGAACGATGATTGCGAAGAAGATTTCGATGCCGAATCCATTCTCGATGAGGAGATCGACGAGGGAATCGATAGCATCATTGGAAGCAGAGCTGAAGAAGATTCCAATGATGCATCCTGTCACGGCGAAGGGGGGAATAATTGGAGCGTGGATTCCTCAGGATTCGGATGTGGCGCAAAACTCGATTTCCGACTGGGGCTGGTGAAGGCTCTCCGGCGTGTCGATGACAGCAATTGGTGGAATTTCCCGGCGGTTGACATAGTGGAAATCTCGCCAAGAATCAACAAGCACACGTCGTCATTTGCTGCGCCGGCGGAAAAGGAGAAGAAGAAGAAGAAAACGTCGTCGTCGACGACGACGAAGAAAGTGGCGGAGAAGACGAAGATGAAATCACTGAGAGCAATTTCGATTCCGAAATCGAATGCCTCAAAACTGATGTTAAAACTGAACTACGACGACGTTTTGAGTGCTTGGTCCGACCGAGGGTCGCCGTTCACCAACGGACGTCGTGGCTCCGATTCACCTGGAAATAATGCCAATGCCCAAGAAGCCCATATAGATTTGCTGACAAATATGGGCGGAGTGAGGGAAGCCAGCGTGATGCGCTACAAAGAAAAGCGGCGGACGCGTCTCATCTCTAAGAAGATTAGATATCAAGTCAGAAAAGTCAACGCTGATCAACGGCCCAGAATGAAGGTTGTTGGTGATTTGGCAGGGGCGATTTGTGAGGAGGGCCAATCATAG 1245 0.4779 MSSILTGAGGGRTYGFDLDFVKSPSPLIRPSHTSSSSTSSASSTISESSNSPLTISTRKSRAPRKRPNQTYNEAAALLSTAYPNLFSNKNLKKPGQFCRPNDAAFLDESAEELFLPFRVFDDSAASFLLQQQIQHKPSSPMDPKMVNLQEKSCQSPGEIISRVNSLELNDDCEEDFDAESILDEEIDEGIDSIIGSRAEEDSNDASCHGEGGNNWSVDSSGFGCGAKLDFRLGLVKALRRVDDSNWWNFPAVDIVEISPRINKHTSSFAAPAEKEKKKKKTSSSTTTKKVAEKTKMKSLRAISIPKSNASKLMLKLNYDDVLSAWSDRGSPFTNGRRGSDSPGNNANAQEAHIDLLTNMGGVREASVMRYKEKRRTRLISKKIRYQVRKVNADQRPRMKVVGDLAGAICEEGQS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1777g00002 414 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 32 399 - -
Pral1777g00002 414 MobiDBLite consensus disorder prediction 27 58 - -
Pral1777g00002 414 MobiDBLite consensus disorder prediction 268 292 - -
Pral1777g00002 414 Pfam CCT motif 363 399 IPR010402 GO:0005515
Pral1777g00002 414 ProSiteProfiles CCT domain profile. 363 405 IPR010402 GO:0005515
Pral1777g00002 414 MobiDBLite consensus disorder prediction 27 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1777g00002 Pral-Chr1777 17466 22248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1777g00002 300 399 C2C2-CO-like Transcription Factor Family AT1G73870 42.735 6.68e-19 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pral1777g00002 CCT 6.8e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1777g00002 - - qsa:O6P43_022368 402.905