Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1774g00006 ATGTGTCTGGCCTATTCCTTCAAACTCACTCCAAAGAGGTTCTCGTTTATTGCTGACATGGGAGGTTGTCTGGGCTCCCAAATTAAAGCTGAGAGCCAGTGTAACACAGGGCCGAATTCAAAACACGTGAGCACTGATGGAAGTGATCTGAGCAGCACGGGCAGTGAGGTCTCAAAGGCCTCGACAACTCATACTCGCCGGAGTGTGGGTGAGATCTTGCAGTCGCCCGATTTGAAGAGCTTTACTTATGCAGAGCTGAAGGCGGCTACACGAAATTTCCGACCAGATAGTGTTTTAGGAGAAGGTGGTTTTGGATCAGTTTTCAAAGGGTGGATTGATGAGCAGTCCCTTACAGCTGCCAAGCCGGGAACTGGCATTATTATCGCTGTGAAAAGACTTAAGCAAGATAGTATGCAAGGTCACAATGAGTGGCTGGCTGAAGTGAATTTTCTTGGACAATTTTCTCATCCCCATCTTGTAAAGTTGATCGGGTATTGCCTTGAAGACGACCACCGCCTTCTGGTGTATGAATTTATGCCTCGAGGCAGCCTGGAGAATCATTTGTTCAGGAGGGGCTCTTATTTCCAACCCCTCTCTTGGAGCCTCCGTTTGAAGGTGGCTCTTGGTGCTGCCAGAGGGCTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATAGGGACTTCAAGACCTCAAACATCTTGCTTGATTCAAATTACAATCCAAAACTTTCTGATTTTGGGTTGGCCAAGGATGGACCCGGGGGGGACAAAAGTCATGTCTCTACCAGAGTATTAGGAACCTATGGATATGCAGCTCCCGAGTATATAGCCACCGGTCACCTGACTGCAAAGAGTGATGTATATAGTTTTGGGGTGGTACTGGTTGAAATGCTATCAGGTCGGCGAGCAATGGACAAGAGTCGACCATCAGGACAGCGCAACTTGGTGGAGTGGGCTAAGCCATACCTGGCGAACAAACGTAAGCTTTTTCTCGTGCTGGATACTCGTCTCGAGGGTCAGTACACAATAGACGAGGCCTACAAGACAGCGACGTTGGCATTGCGATGCATTTCAATCGAATCCAAGTTCAGGCCAAGCATGGAAGAGGTTGTTTCTACATTGGAGCAGCTTCAAGTTCCCATTGTAAATGGAGGCACACAAGAGCCGTCTGTGAAGAGATCCAGTGGCAGAAAAAGTGAAGGTGACGCTAAGAATGGGAGGACCACCACACCTTACCCCCGCCCATCCGCTTCCCCTCTCTATGCTTGA 1272 0.4851 MCLAYSFKLTPKRFSFIADMGGCLGSQIKAESQCNTGPNSKHVSTDGSDLSSTGSEVSKASTTHTRRSVGEILQSPDLKSFTYAELKAATRNFRPDSVLGEGGFGSVFKGWIDEQSLTAAKPGTGIIIAVKRLKQDSMQGHNEWLAEVNFLGQFSHPHLVKLIGYCLEDDHRLLVYEFMPRGSLENHLFRRGSYFQPLSWSLRLKVALGAARGLAFLHSAETKVIYRDFKTSNILLDSNYNPKLSDFGLAKDGPGGDKSHVSTRVLGTYGYAAPEYIATGHLTAKSDVYSFGVVLVEMLSGRRAMDKSRPSGQRNLVEWAKPYLANKRKLFLVLDTRLEGQYTIDEAYKTATLALRCISIESKFRPSMEEVVSTLEQLQVPIVNGGTQEPSVKRSSGRKSEGDAKNGRTTTPYPRPSASPLYA 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1774g00006 423 Pfam Protein tyrosine and serine/threonine kinase 97 375 IPR001245 GO:0004672|GO:0006468
Pral1774g00006 423 SUPERFAMILY Protein kinase-like (PK-like) 67 375 IPR011009 -
Pral1774g00006 423 PANTHER OS01G0588500 PROTEIN-RELATED 58 379 - -
Pral1774g00006 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Pral1774g00006 423 FunFam Probable serine/threonine-protein kinase PBL8 179 394 - -
Pral1774g00006 423 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Pral1774g00006 423 ProSitePatterns Protein kinases ATP-binding region signature. 99 131 IPR017441 GO:0005524
Pral1774g00006 423 MobiDBLite consensus disorder prediction 383 423 - -
Pral1774g00006 423 CDD STKc_IRAK 99 378 - -
Pral1774g00006 423 ProSiteProfiles Protein kinase domain profile. 93 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1774g00006 423 FunFam Serine/threonine-protein kinase BIK1 60 178 - -
Pral1774g00006 423 MobiDBLite consensus disorder prediction 34 67 - -
Pral1774g00006 423 Gene3D Transferase(Phosphotransferase) domain 1 179 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1774g00006 Pral-Chr1774 23550 26151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1774g00006 71 375 Glycoside Hydrolase AT3G07070 49.020 4.64e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pral1774g00006 PK_Tyr_Ser-Thr 7.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1774g00006 - - qsu:111987244 630.172