Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1772g00009 ATGGCCACCGTCACCACTCAGGCTTCCGCCGCCGTCTTCCGGCCATCATGCTCCTCCAGATCCAGATTCCTCACTGGCTCTTCTGGTAAACTACAGAGGCAAGTTGGTTTCAGAACCGTGACACCTCCTTCCTCTGCCTCTTCCTCCTCTTTCAAGGTTGAAGCTAAGAAAGGAGAGTGGCTTCCTGGTCTGCCCTCGCCAGGTTACCTAAATGGAAGTCTTCCGGGTGACAATGGATTTGACCCTCTGGGGCTAGCAGAGGACCCAGAGAACTTGAAGTGGTTCGTGCAAGCTGAACTCGTGAATGGGAGGTGGGCCATGTTGGGTGTTGCAGGAATGCTTCTTCCAGAAGTGTTCACAAAGATCGGAGTCATCAATGTTCCAAAGTGGTACGATGCAGGGAAAGAAGAGTACTTTGCATCATCATCAACCTTGTTCGTGATTGAGTTCATTTTGTTCCATTACGTGGAGATCAGAAGATGGCAAGACATTAAGAACCCTGGAAGTGTCAACCAAGATCCCATCTTCAAGCAATACAGCTTACCCCCTAACGAGGTTGGATACCCAGGTGGCATCTTCAACCCTCTCAACTTTGCACCCACACTTGAGGCCAAAGAGAAGGAGCTTGCTAACGGGAGATTGGCGATGTTGGCATTTTTGGGGTTTGTGGTTCAACACAACGTGACGGGGCAAGGACCATTTGACAACCTGTTGCAGCATCTTTCTGACCCATGGCACAACACAATTGTTCAAACTCTGAGGGGATACTGA 771 0.4994 MATVTTQASAAVFRPSCSSRSRFLTGSSGKLQRQVGFRTVTPPSSASSSSFKVEAKKGEWLPGLPSPGYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKIGVINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVVQHNVTGQGPFDNLLQHLSDPWHNTIVQTLRGY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1772g00009 256 Gene3D Chlorophyll a/b binding protein domain 67 246 - -
Pral1772g00009 256 Pfam Chlorophyll A-B binding protein 67 226 IPR022796 -
Pral1772g00009 256 SUPERFAMILY Chlorophyll a-b binding protein 57 253 - -
Pral1772g00009 256 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 18 252 IPR001344 GO:0009765|GO:0016020
Pral1772g00009 256 FunFam Chlorophyll a-b binding protein, chloroplastic 67 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1772g00009 Pral-Chr1772 42477 43683 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1772g00009 45 249 Chloroplast and Mitochondria Gene Families AT3G61470 53.555 1.70e-75 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1772g00009 K08910 - pvy:116133502 483.411