Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1768g00001 ATGGCCGGTGACGCTGCTAGCAGTGCTGCTGCAATAAAATGTGCCGATATATTGGTAGATAAAGTAACAAAGGAACTTCAATATTTGTGTTGTTACGAGAGATATACAGCTGACTTTGAACGGAAAAAAAAAGATTTGTCAGCTGCAGTGGAGAGTGTGGACGTGAGGATAAGTGAAGCCAAAAGAAGAAATGAGACTCAAATTGATCCTATAGTTAACCGCTGGGTCGAAAAAGCCAACGACCTTATAAAACCGGCAACAAGACCAAAGAAATGGTTTGGTTTCTGTAATGATTGGTTTTCTCAGTGTCTACTCGCGAAGGAATTAGAGAGCATGACTAAAGAGATGGCAGAAATGATGGAGAAAGCTGAGAACTTTTCACAAGTTGCACATGTAGCTGAACGTCCCGGCATGGAATTCTATTCACAAGAGTTTATGCATTTCAAGAGTAGAAACTCAGTTTTTGAACAACTCAGGGAGGAGCTGAAAGATGACAATAATTATAGGATTGGATTGCAAGCGATGGGAGGATCGGGGAAAACCACAATGGCAAAAGCAGTTGGGAAGGAATTTGAAAATTCAAAGGCATTTGATAAAGTTATCTTTATTGAAGTGCCCAACCCTGTTGATGAAAAAAAGATTCGAGATGAAATTGCAAAGAAATTGGAATTGAAGTTAGAGAATGACAAGGATTTAACAGAACAAATATGGATCCAAATTGCTGATGCTGGAAATGTACTCATAATACTTGATGATGTCTGGGAAGAGCTCAAACTTGAGAACATAGGGATTCACCATGGCATTCGTACCCAAGGTCGTTGCTGTGTGTTGCTAACCACACGTTATGAGACAGTTTGTAGAAGAATGAGCTGCCAAAAGACCATTAAACTAGGGGTCTTACTTGAGGAAGATGCAGTGAATCTTTTCCTACATCACGCCACTGAAAGTGGGAAGGATTGTCCTAATAAATTGAAGTTGTTGGCATCAAAAGTTGTGAATGAGTGTGGAAACTTACCAGTCATAGTTGTGGCAGTAGCAAGAACCTTTAGAAACTGGGATCCAAATGAATGGGAGGATGCTTTTGCAGCAATAGAAAAAGATTCGTCCTTAAGGCATGGGAATAATGATGAAGAAGCAAAAAAGTTTTATAATTCTTTGAAAATAAGCTTCAAGTGTCTAGATACAAGAGCTCAGGACCTCATCCTGATATGTTCTTTATTCCCAAGAGCTTATGAAATACCTATAGAGCTTTTAAGCAGAATTGCTATAGGTTTAGGGCTTTCTGAAAATGTTGGCAGCTACTACAAAGCAAGAAGTGAAGTGCTTTCAATCAAAACCACACTCGTACGTTCTGCTTTATTGTTGACTGCAAAAGAAGGATGTGTAAAGATGCACGATGTGATTCGTGATGTGGTCCAACATATAGGAGATGCAAAGATTCAAGTAATCATGGATTCTAAAAGTAAATTGAAGGAGAATATAAAATATTCATCCTGGATGATAGATGACTTTTTCAACTCTTTTGAGAGCGACAATCTTGAGGTTCTTTTAGCATGGGTAAATGCAAATCGTTCTTTGGAAGCTCCTGACACATTCTTTGGAGGCATGGAGGGACTTAGAGTTTTGCTTTTGTATTCCGAGGTTGAGTTTGGGAGAAAATTGCACTTATCACTACCAAAATCAGTTCATTCACTTGAAAATATCCAAACACTATCCCTAGCAAATTGGGAGTTGGGTGATATATCTATTTTGCAAAACCTAAAAAAACTCCAAACTCTTGAGTTGACAAATTGTTCAATTAGTGAATTACCAAATGAAGTTAGCCAACTGGAGAAACTGAGGTTGCTAGGCTTCATAGATTGTTCAATCGAAAAGAATAACCCATTTGAAGTGATTGGGAGATGCTCGAAACTTGAAGCATTGTATTATGTTTCAAATCATGACACTCTTAAAATTAATCCAAAGCCTTCTAAAATTATAGATCTCCATCAAGAATTTGGAATATATCATGTAGAAGGCAACTATTCCTTCCAGCGTTCTTTTCAATTGGATGCTTCAATAAAGAGATATTTCAGTTCAACCAATTTAGAAGGGATCTTGTCTGAAAGCACAATCAAATCCCTAGTAGCAAGAGCAGAGATTCTCGAGTTAACAGAATGTAATGAAGCAAGATGGGCAAATCTCATTCCTGACATGGTTCATCCTAAAGAAAATGATGGCATGAATGACTTGCTTAGGCTTTCTTTGGAATCTTGGCCTGCAATACAATGCCTCATCAATACAAGTGGAATTCAATCTAATGCAACCATCTTCTCCAACTTAGTTGAGCTGCGACTTTATAATATGCATGTGAGGGAATTATGTCATGGCCATCCTCCTAATGACTTTCTCAAGCAACTAGAGAAGCTAGACTTAAATGATTGTGGTGAACTAGATGGCACATTATTGAAGGGCAAGCTAGAGCTAAGTAATCTAAAGTCTATAGCATTAAATGCTTGTTCAATGACATGTCTTTTCCACTTATCTGCAGCTCAGAGTCTAAGGCAATTGGAAAATTTACACATAGAGGGATGCTCAAAGTTGAAATGCCTAATAAGTGATGATGTGAAATCAATAGAGCAGGAAGTGGATGATCATCAAGATCCTAATCAAAAGATCCACCACTTGATGTTCCCGAAATTGAAGTTTTTCAAGGTTGAAGAATGTCATGCATTGAAATTTATATTTCCAATTTTTCCTTGCAAAGAGCTAGAAAGTGTGATAGTCGATGGTTGTAATGAGCTAAGATACATATTTGGACAATGCTTAGAGGAGGGAGGAATGTATCAAATCGAAAAAGAAATCATACTCCCCTTACTACAAGAAATATATATTGCAAACGTACCAAAATTCGTCAACATCTATCCAGAACATTATCTCCCACAACCCTCCCAAGTGCAGAAATCATGGGACCCTCTATGCTGTTTATCTTCAAAAGCAAGTGCCTTAAGTATAGATGAACCATCTTTTTTCAAGGGCAATCAACTGGGCCATACTCAGGCATTAAAGGAGAAACATCTCGGTAGAGCTGATGGACTTTTTACACCTCCATTATATCCATACAAGAATTTGAGAAAGATGAGTATAGAGGGATTTTCTGGATTGAAGTCACTTCTTACCCTATCCATTGCCTCATCATTGAAATTGTTGGAAGAATTGACAATTAGCGAATGTGGTGAAATGGAACATATAGTAACAGATGAGGGGCATGTTTACAATCATATGAATGATTGTTATATCTTTTCCAACTTAAAGGAGCTTGAAGTCTTCAATGCTGAAAAGTTGAAATATGTGTTTGGAAAATGTCATTCCAATCAGTGGCATAATGTTCATATCGAACTTAACCTCCTGAATCTCAAAAGCCTATGCCTTCATGATGTGCCAAATATGGTTAGTATCTGTACCAAAAACTATTCTGTGAAAGCATTATCTCTACAAGATATAGATTTGGAAAACTGCCCACAACTTCTCATAAATACTATTATGGACTTATCCGTTGAAGCGCCAAAAAGAGAAGATCTCTCAAAGAAAATGGAAAAAGGAAAAAAAGAATTCACATGTTTGTATTTAACCAAGACATCCAAAGAAAAGCACGTGCCAAGTACAGCTCAAGGATATTTTCCACTACCATTATATCAATCCAATTTGAGAAAGATTGAGATAACTGGATTTTCCAAGTTAACGTCACTCTTTACCATATCCATTGCCTCGTCACTGAAGTTCTTGGAAACATTGTATGTCAAGTGGTGTGACATGCTGGAACATATAATAACAGACGAGGGGGCTAATAGTCAGGGTCATCTGAATGTGCACTCTATCTTTCCCAACTTACAGCAAATTCATGTTTGGAGCTGTAACAATTTGGAATATGTATTCCCAGCTTTTTATTCAAAAGACTTTAGGGAGTTGGGATCTGTGAGCATCCAGAAGGCAGAAAAGATGAAATACGTATTTCGAGAATGTCATGCTGATCAGAATCATAATGTTCAGAGTAAACTTAATCTCCCGGCCTTGAAGACAGTATACCTTGTAGATTTACCAAATATGGTTAGTATTTGCACAGAAAACTATTACGTGGAGGTATTACATCTAGAATATATTAGAATTGAAGGATGTCTACAGCTTGCCCAAACTTTTATAGATTTCTTGGTTGGTGGACACAAAAGACAAGAAGATATCTCAAGGAGAAAGGCATTATCTTTCAAGGAGAAAGGTAAGGCACTTTCGAACTTGCAAGAGTTACCTGATTTAAGCGACATCTACGTGGGATCTAAAAACTCTTTGAGCTTTAGGAACCTTTCCGGGCTAACATTGGTAGGATGCAAACAGTTGAAGTTCATACTATCCGCATCTACCACAAGAAGCATACCAGAATTGAGAAGTCTATTTATATCAGACTGTGAAGAGCTGGTGAGCATGATTGAGGATGATGAAGAGAATCAGAAACATCCTTTAGATTTGCATCAACCATGTTTCCCAAAGCTATGCAGAATTCGAGCGAAGCACTGTAAGAAGTTGAAATGCCTATTCTCTATCTCCACATGTGCTAAACTTCCATGTCTCTTGCTGTTGGAGATAGAAGATGCCCCTGAGCTTGCGCAGGTATTTGAATGGAAGCAGAGTGCGCCACAAGAGTTGGTCATCAAAGATGTGCTTCCAAATTTACTTGCACTAAGACTGGTAGAATTACCAAGTCTTCACACTATCTACCATGGAATTGATTTCCAAACTGTGAAAATCCGTATTGTGCAAGATTGTAACAATATCCCTTCAACTAATGTCGGCTCCTCTGAGATATCTAATTATGTCAATTATTCGTTGACACAAGAAAAGAGGAACTTTGAGGATGACCATGACTTCGTCTACACATGCCATATTATTTACAGCTGGGCCGATGAGGTTAGTGCTAGACTTCTACTAATTTTGGTAGAAATTCAATAG 4980 0.3787 MAGDAASSAAAIKCADILVDKVTKELQYLCCYERYTADFERKKKDLSAAVESVDVRISEAKRRNETQIDPIVNRWVEKANDLIKPATRPKKWFGFCNDWFSQCLLAKELESMTKEMAEMMEKAENFSQVAHVAERPGMEFYSQEFMHFKSRNSVFEQLREELKDDNNYRIGLQAMGGSGKTTMAKAVGKEFENSKAFDKVIFIEVPNPVDEKKIRDEIAKKLELKLENDKDLTEQIWIQIADAGNVLIILDDVWEELKLENIGIHHGIRTQGRCCVLLTTRYETVCRRMSCQKTIKLGVLLEEDAVNLFLHHATESGKDCPNKLKLLASKVVNECGNLPVIVVAVARTFRNWDPNEWEDAFAAIEKDSSLRHGNNDEEAKKFYNSLKISFKCLDTRAQDLILICSLFPRAYEIPIELLSRIAIGLGLSENVGSYYKARSEVLSIKTTLVRSALLLTAKEGCVKMHDVIRDVVQHIGDAKIQVIMDSKSKLKENIKYSSWMIDDFFNSFESDNLEVLLAWVNANRSLEAPDTFFGGMEGLRVLLLYSEVEFGRKLHLSLPKSVHSLENIQTLSLANWELGDISILQNLKKLQTLELTNCSISELPNEVSQLEKLRLLGFIDCSIEKNNPFEVIGRCSKLEALYYVSNHDTLKINPKPSKIIDLHQEFGIYHVEGNYSFQRSFQLDASIKRYFSSTNLEGILSESTIKSLVARAEILELTECNEARWANLIPDMVHPKENDGMNDLLRLSLESWPAIQCLINTSGIQSNATIFSNLVELRLYNMHVRELCHGHPPNDFLKQLEKLDLNDCGELDGTLLKGKLELSNLKSIALNACSMTCLFHLSAAQSLRQLENLHIEGCSKLKCLISDDVKSIEQEVDDHQDPNQKIHHLMFPKLKFFKVEECHALKFIFPIFPCKELESVIVDGCNELRYIFGQCLEEGGMYQIEKEIILPLLQEIYIANVPKFVNIYPEHYLPQPSQVQKSWDPLCCLSSKASALSIDEPSFFKGNQLGHTQALKEKHLGRADGLFTPPLYPYKNLRKMSIEGFSGLKSLLTLSIASSLKLLEELTISECGEMEHIVTDEGHVYNHMNDCYIFSNLKELEVFNAEKLKYVFGKCHSNQWHNVHIELNLLNLKSLCLHDVPNMVSICTKNYSVKALSLQDIDLENCPQLLINTIMDLSVEAPKREDLSKKMEKGKKEFTCLYLTKTSKEKHVPSTAQGYFPLPLYQSNLRKIEITGFSKLTSLFTISIASSLKFLETLYVKWCDMLEHIITDEGANSQGHLNVHSIFPNLQQIHVWSCNNLEYVFPAFYSKDFRELGSVSIQKAEKMKYVFRECHADQNHNVQSKLNLPALKTVYLVDLPNMVSICTENYYVEVLHLEYIRIEGCLQLAQTFIDFLVGGHKRQEDISRRKALSFKEKGKALSNLQELPDLSDIYVGSKNSLSFRNLSGLTLVGCKQLKFILSASTTRSIPELRSLFISDCEELVSMIEDDEENQKHPLDLHQPCFPKLCRIRAKHCKKLKCLFSISTCAKLPCLLLLEIEDAPELAQVFEWKQSAPQELVIKDVLPNLLALRLVELPSLHTIYHGIDFQTVKIRIVQDCNNIPSTNVGSSEISNYVNYSLTQEKRNFEDDHDFVYTCHIIYSWADEVSARLLLILVEIQ 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1768g00001 1659 Coils Coil 109 129 - -
Pral1768g00001 1659 Gene3D Ribonuclease Inhibitor 1003 1308 IPR032675 -
Pral1768g00001 1659 SUPERFAMILY RNI-like 1029 1456 - -
Pral1768g00001 1659 SUPERFAMILY RNI-like 533 864 - -
Pral1768g00001 1659 Gene3D - 389 473 IPR036388 -
Pral1768g00001 1659 PRINTS Disease resistance protein signature 585 601 - -
Pral1768g00001 1659 PRINTS Disease resistance protein signature 240 254 - -
Pral1768g00001 1659 PRINTS Disease resistance protein signature 335 349 - -
Pral1768g00001 1659 PRINTS Disease resistance protein signature 169 184 - -
Pral1768g00001 1659 Gene3D Ribonuclease Inhibitor 474 655 IPR032675 -
Pral1768g00001 1659 Pfam NB-ARC domain 155 391 IPR002182 GO:0043531
Pral1768g00001 1659 Gene3D Ribonuclease Inhibitor 681 960 IPR032675 -
Pral1768g00001 1659 Gene3D - 300 388 IPR042197 -
Pral1768g00001 1659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 404 IPR027417 -
Pral1768g00001 1659 Gene3D - 138 296 IPR027417 -
Pral1768g00001 1659 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1091 1331 - -
Pral1768g00001 1659 Gene3D Ribonuclease Inhibitor 1347 1565 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1768g00001 Pral-Chr1768 8442 14313 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1768g00001 170 613 WRKY Transcription Factor Family AT5G45050 24.512 1.95e-06 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1768g00001 - - pcin:129311690 2061.19