Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral1766g00001 | ATGAGCTGCAACGGTTGTCGTGTGCTTAGGAAAGGTTGCAGCGACGACTGCATGCTCCGAGATTGCCTTCTGGGCATAGAGAGCCCACAAGCCCAAGCCCATGCCACCGTCTTCGTCGCTAAATTCTTCGGCCGCGCCGCCCTCATGTCCTTCGTCTCCGCCGTACCCTCCCCGCAGAGATCCGCTTTGTTTCGATCGCTTTTGTACGAAGCAGTGGGACGAACCATAAATCCGGTGAACGGTGCAGTGGGCCTGCTCTGGACCGGGAATTGGCATCTTTGCCAATCAGGAGTTCAGAGAGTTCTCTACGGCGGCGCCTTGACTCCACTCCCTGACGTCTCCGGAGGAAATTCGGCACCGACTGCGGCGGAGGACGATTGCTTCGGACCCGTTCTAGATCTTTCTAGGCAGCGAGACTATATGGCGGGATTGGGATCAAGTAACCTAAAGAGAAAAGTTCGTTGTTACGACTTCGTGTTGGAGAATAATATCCAAGCACGCGATCATCTTGTTGATCATCAGTACTGCTTGGGGAGATCAGGTTCGCCGGAGAGAGTGGTAGTGGTTGGCACCGGCCGAAAGGATGATGGGAGCGCAGCGACGCCATCGGAGGGATCTGAAACGTCAACGTTAGGGAGTAGCGCTGCGCAGTGTGGCACTGCTGAAAGGAAGCTCCTCAGGCTTTTCTTCTAG | 693 | 0.5541 | MSCNGCRVLRKGCSDDCMLRDCLLGIESPQAQAHATVFVAKFFGRAALMSFVSAVPSPQRSALFRSLLYEAVGRTINPVNGAVGLLWTGNWHLCQSGVQRVLYGGALTPLPDVSGGNSAPTAAEDDCFGPVLDLSRQRDYMAGLGSSNLKRKVRCYDFVLENNIQARDHLVDHQYCLGRSGSPERVVVVGTGRKDDGSAATPSEGSETSTLGSSAAQCGTAERKLLRLFF | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral1766g00001 | 230 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 123 | - | - | |
Pral1766g00001 | 230 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 99 | IPR004883 | - | |
Pral1766g00001 | 230 | MobiDBLite | consensus disorder prediction | 201 | 215 | - | - | |
Pral1766g00001 | 230 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Pral1766g00001 | 230 | MobiDBLite | consensus disorder prediction | 192 | 215 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral1766g00001 | Pral-Chr1766 | 2763 | 4048 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral1766g00001 | 1 | 116 | AS2 family | AT3G49940 | 72.414 | 3.05e-59 | 185 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Pral1766g00001 | LOB | 2.9e-24 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral1766g00001 | - | - | pcin:129284755 | 336.265 |