Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1765g00017 ATGAGGAACACAGACATGGAGGTGGGTAAGCTTGAAATTAGGTCATCAGATAAGAGAGAAGAAGAGGAAGAAGAAGAAGTGATGGCTCCTGGGTTTAGATTCCACCCCACAGATGAAGAACTTGTAGGGTTTTATCTGCAGAGAAAAGTGAAGAAGAAGCCTCTTCCAATGGAACTCATCAAACAGATTGACATCTACAGATACCATCCTTGGGATCTTCCAAAGAATAGCCATGGGGTGGAAGGGGAAAGAGAAGGATACTTTTTCTGCAGGAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAACAGAGTGACAGTGAGTGGATCTGGTTTCTGGAAAGCTACAGGAATTGATAAAACTATTTATGGAGGAGGCGGAGGTCAAAACGGCGTCGTAATTGGGCTGAAGAAGTCATTGGTGTATTATCAAGGAAGTGCTGGAAAAGCCTCAAAAACTGAGTGGATGATGCATGAGTTTCGTCTTCCTCCCAACAACTCTACTGTCGATCATCATCTTCTTCATGATGCTGAAGTTTGGACACTGTGCAAAATATTCAAACGAACCCCGTCTCAGAAGAAGTACACGCAAGCAGCAATCAAACCCAGCCTAGCTCCTTCAACTCCTGAATCAGGAAACTTAAGACCCGACGTCAATGGCAACTCATGCTTCACTTTCAAAAACTCAATGATCATTCAGCAAAATGATGAAAGGAAGCAGATTAGGAAGAGCATTGAAGAGGTTGAATATGAAAGAAATCACTTGTTTCTGGATCAGTTAGCTCAAGCTTCACCATCAATAGTATCTTACCCTAGCTTTTGGGATACTGGTATAATGGAAGAGAATATATTTGCTAATGCAAACTGGTATGAGCCCCAACATATGGTTCAATTAGCTATGGATGATCCATCCAAAATTTATTATGACTGTACGTAG 936 0.4209 MRNTDMEVGKLEIRSSDKREEEEEEEVMAPGFRFHPTDEELVGFYLQRKVKKKPLPMELIKQIDIYRYHPWDLPKNSHGVEGEREGYFFCRRGRKYRNSKRPNRVTVSGSGFWKATGIDKTIYGGGGGQNGVVIGLKKSLVYYQGSAGKASKTEWMMHEFRLPPNNSTVDHHLLHDAEVWTLCKIFKRTPSQKKYTQAAIKPSLAPSTPESGNLRPDVNGNSCFTFKNSMIIQQNDERKQIRKSIEEVEYERNHLFLDQLAQASPSIVSYPSFWDTGIMEENIFANANWYEPQHMVQLAMDDPSKIYYDCT 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1765g00017 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 25 233 - -
Pral1765g00017 311 SUPERFAMILY NAC domain 26 187 IPR036093 GO:0003677|GO:0006355
Pral1765g00017 311 MobiDBLite consensus disorder prediction 1 27 - -
Pral1765g00017 311 ProSiteProfiles NAC domain profile. 28 188 IPR003441 GO:0003677|GO:0006355
Pral1765g00017 311 Pfam No apical meristem (NAM) protein 30 162 IPR003441 GO:0003677|GO:0006355
Pral1765g00017 311 Gene3D NAC domain 37 193 IPR036093 GO:0003677|GO:0006355
Pral1765g00017 311 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1765g00017 Pral-Chr1765 215191 219633 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1765g00017 22 213 NAC Transcription Factor Family AT5G39820 50.235 9.84e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1765g00017 NAM 5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1765g00017 - - qsa:O6P43_021055 288.5