Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1765g00016 ATGACTCCTGGGTTTAGATTCCACCCCACAGATGAAGAACTTGTAGGGTTTTATCTGCAGAGAAAAGTGAAGAAGAAGCCTCTTCCAATGGAACTCATCAAACAGATTGACATCTACAGATACCATCCTTGGGATCTTCCAAAGAATAGCCATGGGGTGGAAGGGGAAAGAGAAGGATACTTTTTCTGCAGGAGAGGGAGAAAGTACAGGAACAGCAAGAGGCCTAACCGGGTGACAGCGAGTGGGTCTGGTTTCTGGAAAGCTACAGGAATTGACAAACCTATTTATGGGGCAGGAGGAGGTCAAAAAGGCGTCGTGATTGGGCTGAAGAAGTCACTAGTGTATTATCAAGGAAGTGCTGGAAAAGCCTCAAAAACCGAGTGGATGATGCACGAGTTTCGTCTTCCTCCCAACAACTCTGCTGTCGATCATCATCTTCTTCATGATGCTGAAGTTTGGACGCTGTGCAAAATATTCAAACGAACCCTATCTCAGAAGAAGTACACACAAGCAGCAATCAAATCCAGCCTAGCTCATTCAACTCCTGAATCAGGAAACTTAATATCTGACGTCAATGGCAACTCATGCTTCAATTTCAAAAACCCAATGATCATTCAGCAAAGTGATGAAAGGAAGCAGATTAGGAAGAGCATTGAAGAGGTTGAATATGAAAGAAATCACTTATCTCTGGATCAGGTAGCTCAAGCTTCACCATCAATTGTATCTTACCCTAGCTTTTGGGACCCTCGTGTGATGGAAGAGAATATATTCGCTAATGGAAACTGGGATGAGCTTCAACCTATGGTTCAATAA 813 0.4342 MTPGFRFHPTDEELVGFYLQRKVKKKPLPMELIKQIDIYRYHPWDLPKNSHGVEGEREGYFFCRRGRKYRNSKRPNRVTASGSGFWKATGIDKPIYGAGGGQKGVVIGLKKSLVYYQGSAGKASKTEWMMHEFRLPPNNSAVDHHLLHDAEVWTLCKIFKRTLSQKKYTQAAIKSSLAHSTPESGNLISDVNGNSCFNFKNPMIIQQSDERKQIRKSIEEVEYERNHLSLDQVAQASPSIVSYPSFWDPRVMEENIFANGNWDELQPMVQ 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1765g00016 270 Pfam No apical meristem (NAM) protein 3 135 IPR003441 GO:0003677|GO:0006355
Pral1765g00016 270 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 208 - -
Pral1765g00016 270 ProSiteProfiles NAC domain profile. 1 161 IPR003441 GO:0003677|GO:0006355
Pral1765g00016 270 Gene3D NAC domain 10 165 IPR036093 GO:0003677|GO:0006355
Pral1765g00016 270 SUPERFAMILY NAC domain 2 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1765g00016 Pral-Chr1765 197450 201028 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1765g00016 3 186 NAC Transcription Factor Family AT5G39820 51.220 1.29e-62 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1765g00016 NAM 3.9e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1765g00016 - - qsa:O6P43_021055 289.271