Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1764g00005 ATGGCTACTCAATGCAGATTGTTGTGGTGTTTTCTCATTCTTTTGGTTCTCTCAAACTCTGTTTCTTCTCAAACCGTCGTCAAGACCTTGCCTGGTTTTGAAGGGAACCTTCCTTTCTTTCTTGAAACTGGGTACATTGGGGTAGGAGAAATGGATGAGATTCAGCTGTTTTATTACTTCTTTAAATCAGAGAGGAAGCCAAATGAGGACCCTCTTGTGCTCTGGCTTCCCACTGGCCCCGGCTGCTCTGCTCTCTCTTCCATCTTGTACGAGAATGGTCCAATTCGTTTCAATTACAAGAATTCAAGCATCCAAGACAAACCGGTTTTAGAGTTGAATATTTACTCTTGGACTAAGGTGGCCAATGTAATTTTCCTGGATGCACCCGTTGGCTCTGGGTTTTCTTACTCAACAGCTTCCTCAGGATACAACACCAGTGACATAAAAACTGTCTCAAACATTTACGAGTTTATCAGAAAGTGGCTCTTAATGCATCCTGAGCACATGGAAAATCAACTTGTAATTGGTGGAGAATCTTATTCTGGCATCATTGCTCCAGCTGTTGTCCAGAAAATTTTAGAAGGCAATGCAGCCAAAGAGCATCCCTGGTTGAATATCCAAACTTTGGTTGTGGGAAACCCATTCACTGATGTATATTACGATATAAATTCAAGAGTTAAGTTTGCTGACAGAGTTGCACTTATATCTGATGATCTCTATGAGCAAGCTAAATTTCACTGTCATGGAGAATATGTTCACCCAAACAGAAGTAATACTGCCTGTGCTGCGGTTCTTGAAATGATCCATCGGTGTTTGGAAGACTTGAATGCTGCGATGATACTGGAAAACAAGTGTCCAGCTTTCTCTCCAAGACCAAAGAACATCCAGTGGGATTTAGGTTCTCTTGGTCTTAATCTCACTGATTCACTCTTCTCAGAGGCCAATCCCATTACTTACACCGGATATTGCAGAAAATATAACTATCTGTTTGCCTCGCTGTGGGCAAATGATTTAGCTGTACAAGAAGCTCTGAACGTTAGAAATGGAACTATAGAACATTGGGAGAGATGCAATAAGAGCATAGCTTACACTCGTGACATAAAAAGTAGCCTCCATTATTACAAGAACTTTTTAAGTGCAAAGCCTCTCCGAGTTCTGGTTTACAGTGGAGATCATGATCTGATCATCCCATATGTGGGCACAGAGGAATGGATTGCAAGTTTGAACATGACTATATCTGCTGGTAATCATGAGTGGAGGCCTTGGTATGTTGATGGACAGGTTGCAGGATATACAGAGATATACACCAAAAAGGAGTTCCGTATAACATATGCAACAGTTAAGGGAGCAGGTCATACAGCTCCAGAGTACAAGCCAAAGCAGTGCTATAACATGATTGAGAGATATCTTGCTCATTTCTTCCTTTAA 1428 0.4139 MATQCRLLWCFLILLVLSNSVSSQTVVKTLPGFEGNLPFFLETGYIGVGEMDEIQLFYYFFKSERKPNEDPLVLWLPTGPGCSALSSILYENGPIRFNYKNSSIQDKPVLELNIYSWTKVANVIFLDAPVGSGFSYSTASSGYNTSDIKTVSNIYEFIRKWLLMHPEHMENQLVIGGESYSGIIAPAVVQKILEGNAAKEHPWLNIQTLVVGNPFTDVYYDINSRVKFADRVALISDDLYEQAKFHCHGEYVHPNRSNTACAAVLEMIHRCLEDLNAAMILENKCPAFSPRPKNIQWDLGSLGLNLTDSLFSEANPITYTGYCRKYNYLFASLWANDLAVQEALNVRNGTIEHWERCNKSIAYTRDIKSSLHYYKNFLSAKPLRVLVYSGDHDLIIPYVGTEEWIASLNMTISAGNHEWRPWYVDGQVAGYTEIYTKKEFRITYATVKGAGHTAPEYKPKQCYNMIERYLAHFFL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1764g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 442 455 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 FunFam Carboxypeptidase 322 473 - -
Pral1764g00005 475 SUPERFAMILY alpha/beta-Hydrolases 27 472 IPR029058 -
Pral1764g00005 475 Gene3D - 323 473 - -
Pral1764g00005 475 FunFam Serine carboxypeptidase-like 19 20 291 - -
Pral1764g00005 475 Pfam Serine carboxypeptidase 31 471 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 27 459 IPR001563 GO:0004185|GO:0006508
Pral1764g00005 475 ProSitePatterns Serine carboxypeptidases, histidine active site. 442 459 IPR033124 GO:0004185
Pral1764g00005 475 Gene3D alpha/beta hydrolase 20 291 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1764g00005 Pral-Chr1764 8263 12505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1764g00005 331 471 Calmodulin-binding Proteins AT2G22960 48.936 3.05e-37 133