Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1750g00003 ATGGCGGAGATTGCTGCCAGTAGTGCTGCTGCAACAAAATGCACTGATATATTGGTAGACAAAGTAACAAAGGAACTTCCATATTTGTGTTGTTACAAGAGTTATGCAGCTGAATTTGAAGAGAAAAAAGGAGAATTGTCAGCTGCAGTGGAGAGTGTGGACATGAAGATAAAAGAAGCCAAAAGAAGGAATGAAACCCAAATTGACCCTTTAGTTAAGCATTGGGTTCGAAAAGCCAACAACTTCATTCAGCAAGAAACAAGACCAAAGAAATGGTTTGGTTTCTGTAATGATTGGTTTTCGCAATATTCACTGGCGAAGAAATTAGAGCGCATCATGCAAGAGATTCCAACAATAATGGAGAAAGCTGAGAACTTCTCACAAGTTGCACGTGCAGCTGGACCTCCAGGCATGGAGTTCTATTCACAAGAGTTTATGCATTTTAAGAGTAGAAACTTAGTTTATGAACAACTTAGGGAGGAGCTGAAAAATGACAATATACATAGGATTGGATTGCAAGCAATGGGAGGATCAGGGAAAACCACAATGACAAAAGCAATTGGTAAGGAACTTGAAAATTCAAAGGCATTTGATAAAGTTGTCTTCATTGAAGTGCCTAATCCTGTTGACGAAAAGAAGATTCAAGATGAAATTGCAAAAAAATTGGAGTTGAAGTTGGAGGATGGCAAGGATTTAACACACGCAGAACAAATATGGATCAGAATCACTAATGCTGGAAGTGTACTCATAATACTTGATGATGTCTGGGAAGAGCTCAAACTTGAGAACATAGGGATTCACCATGGCATCCATAGCCAGGGCCGGTGTTGTGTCTTGCTAACCACACGTTATGAGACAATTTGTAGAAGAATGAGCTGCCAAAAGACTATTAAACTAGGGCTCTTACATGAGGAAGACGCAGTGAATCTTTTCCTACATCATGCCACTGAAAATGGGAAGGATTGTCCTAATAAATTGAAGTTGCTAGCATCAAAAGTTGTGATTGAGTGTGGAAACTTACCAGTTGTAATTGTAGCAGTTGCACGAACCTTTAGAAATTGGGATCCAAATGAATGGGAGGATGCTTTTGCAGTAATAGAAAAAGATTCATCCTTAAGGCATGGGAACATTGATGAAGAAGTGAAAAAGTTTTACAATTCTCTGAAAATAAGCTTCAAGTGTCTAGATAGAGGAGCGCAAGATCTCATCCTGCTATGTTCTATATTCCCAAGAGCTTATGAAATACCAGTAGAGGTTTTAAGCAGAATTGCTATAGGTTCAAGGCTTAGTGAAAATGTTGGCAGCTACTATAGAGCAAGAAGTGAAGTGCTTTCAATCAAAACCACACTCGTACGTTCTGCTTTATTGCTCACTACTAGAGAAGGATTTGTAAAGATGCATGATGTGATTCGTGATATAGCCCATCAAATAGGAGATGAAAAGATTCAAGTAATCACGGATTCTAAAAGTAAATTGAAGGAGAATGTAAAATATTCATCCTGGATGATAGATGACTTTTCCAACTCTTTTGAGGGCATTAATCTTGAGGTTCTTTTAGTATGGGTAAATAATGCAAGTCATCCTTTGGGAGTTCCTGAGGCATTCTTTGGAGGTATGAAGGGACTTAGAGTTTTGCTTTTGTGTTCTAAGGTTAAGTTTCGGAGAACATTGGCCTTGTCACTACCAAAATCAATTCATTCACTTGAAAATATCCAAACACTGTCCCTAACAAATTGGGAGTTGGGTGATATATCTATTTTGCAAAACCTCAAAAAACTCCAAACTCTTGAATTGACAAATTGTTCAATTAGTGAATTGCCAAATGAAGTTAGCCAACAGGAGAAACTGAGGTTGCTAGGCTTGGTAGATTGTTCAATCGAAAAGAATAACCCGTTTGAAGTGATTGGGAGATGCTCGAAACTTGAAGTATTGTATTATATTTCAAATCATGACACTCTTAAAATTAATCCAAAGCCTTCTAAAATTATAGATCTTGATCAAGAATTTAGAATATATCATGTAGAAGGCAACTACTCTTACCAGCGTTCTTTTCAATTGGATGCTTCAACAAAAAGATATTTCAATTCAACCAAGTTAAAAGGGATCTTGTCTGAAAGCACAATCAAATCCCTGGCAGCAAGAGCAGAGATTCTTGAGTTAACAGAATGTAATGATACAAGATGGACAAACCTTATTCCTGACATAGTTGATCCTCAAGAAGATGAAGGCATGAATGGCTTAATTAGGCTTTCTTTGAAATCTTGGCCTGCAATACAATGCCTCATCAATACAAGTGGAATTCAATCTCATGCAACCATCTTCTCAAACTTAGTTGAGCTACGACTTTCTAACATGTGTGTGAGGGAATTATGTCATGGTGATTTTCCTAATGACTTTCTCAAGCAACTAGAGAAGCTATACATAAGTGGTTGTGCTGAAATAGACGGCACACTATTGAAGGGCAAGCTAGAGCTAAGTAGTTTGAAGTCTATAGAGTTAAATGGTTGTTCGATGACATATCTTTTCTGTCTATCCACAGCTCAAAGTCTAAAGCAACTGGAAAATTTGGACATAAGTGGATGCTCAAAGATGAAATGCCTAATAAGTGATGATAAAGATCTGCAGAGCAAAAAGTGGACGATCATCATGATTGTAATCAAAAGACCCATCACTCAATGTTCCCGAAATTGA 2691 0.3761 MAEIAASSAAATKCTDILVDKVTKELPYLCCYKSYAAEFEEKKGELSAAVESVDMKIKEAKRRNETQIDPLVKHWVRKANNFIQQETRPKKWFGFCNDWFSQYSLAKKLERIMQEIPTIMEKAENFSQVARAAGPPGMEFYSQEFMHFKSRNLVYEQLREELKNDNIHRIGLQAMGGSGKTTMTKAIGKELENSKAFDKVVFIEVPNPVDEKKIQDEIAKKLELKLEDGKDLTHAEQIWIRITNAGSVLIILDDVWEELKLENIGIHHGIHSQGRCCVLLTTRYETICRRMSCQKTIKLGLLHEEDAVNLFLHHATENGKDCPNKLKLLASKVVIECGNLPVVIVAVARTFRNWDPNEWEDAFAVIEKDSSLRHGNIDEEVKKFYNSLKISFKCLDRGAQDLILLCSIFPRAYEIPVEVLSRIAIGSRLSENVGSYYRARSEVLSIKTTLVRSALLLTTREGFVKMHDVIRDIAHQIGDEKIQVITDSKSKLKENVKYSSWMIDDFSNSFEGINLEVLLVWVNNASHPLGVPEAFFGGMKGLRVLLLCSKVKFRRTLALSLPKSIHSLENIQTLSLTNWELGDISILQNLKKLQTLELTNCSISELPNEVSQQEKLRLLGLVDCSIEKNNPFEVIGRCSKLEVLYYISNHDTLKINPKPSKIIDLDQEFRIYHVEGNYSYQRSFQLDASTKRYFNSTKLKGILSESTIKSLAARAEILELTECNDTRWTNLIPDIVDPQEDEGMNGLIRLSLKSWPAIQCLINTSGIQSHATIFSNLVELRLSNMCVRELCHGDFPNDFLKQLEKLYISGCAEIDGTLLKGKLELSSLKSIELNGCSMTYLFCLSTAQSLKQLENLDISGCSKMKCLISDDKDLQSKKWTIIMIVIKRPITQCSRN 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1750g00003 896 Gene3D - 301 390 IPR042197 -
Pral1750g00003 896 Gene3D - 391 476 IPR036388 -
Pral1750g00003 896 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 38 869 - -
Pral1750g00003 896 PRINTS Disease resistance protein signature 242 256 - -
Pral1750g00003 896 PRINTS Disease resistance protein signature 169 184 - -
Pral1750g00003 896 PRINTS Disease resistance protein signature 337 351 - -
Pral1750g00003 896 PRINTS Disease resistance protein signature 848 864 - -
Pral1750g00003 896 Pfam NB-ARC domain 156 393 IPR002182 GO:0043531
Pral1750g00003 896 Gene3D Ribonuclease Inhibitor 477 678 IPR032675 -
Pral1750g00003 896 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 406 IPR027417 -
Pral1750g00003 896 Gene3D - 137 298 IPR027417 -
Pral1750g00003 896 SUPERFAMILY RNI-like 529 865 - -
Pral1750g00003 896 Gene3D Ribonuclease Inhibitor 685 881 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1750g00003 Pral-Chr1750 61382 64072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1750g00003 166 606 WRKY Transcription Factor Family AT5G45050 23.077 7.68e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1750g00003 - - pcin:129311690 1207.97