Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1750g00002 ATGGCGGCAATAGGAGAGGGCGTGGCCACCCATGTCGCGGAATCATTGGTAGATAAACCAATGAAGGAACTCAAATACTTGTGTTGTTACAAGACCTATGTCGATGACTTTGAAGAGGAGAAGACGAGTTTGAGTGCAAAAAGAAACACAGTGCTTAAGAATATTAAAGAAGCCAACCACAGAAATGAGAATCAGGTTGAAGATGAGGTTGAACTGTGGTTAGGCAGAGCCAAAGATCTCATAGAAGAAGACACAAAAGGAAAGAAGAAATGGTTTGGTTTGGCCACTAATTGCTTTTGGCAGTACAAGCGAGGCAAGGAGCTTGAAGGGAAGACGCAAAAGATTAAACGACTGATGGAACAGAGTAACTTCGCTCGTGTTGCTCGTTCAACTGGGCTTCCAGGCATCGGGTTCTATTCTTCTCCAAATTTTATCACTTTTGAGGATAGAAAGTTGATCTCTCAGAAGCTGAAGGAGGCATTGAATGATGACAACAACTTTATGATTGGATTGTACGGGCTAGGCGGAACAGGGAAGACCACAATGGCAATAGAAGTAGGTAAAGATGTTGCAGAATCAAAGTTGTTTGATAAGGTCATCTTCAGTGTTGTCTCAAAGGATGTAAGCTTGAAAAAGATTCAGGGCAACATTGCAAAACAGTTAGATTTGCCTCTAACTGAAGGAATGGATGAATCTGAGCAAGCACAAGAATTGTGGAAAAGAATAGCAGAAGGTGGAGAAAAGGTACTTATAATACTAGATGACATGTGGGAAAAGCTTACACCGCGAGATATTGGGATTCCTCTGGGCCGCCATGGCAAGGGTCATTGTGCTGTTTTGCTAACCACACGTGATTGGAGAGTTTGTAGAGGTATGGGATGCCATGAGACTATTGAACTTAAGGTCTTAAATGACGAGGATGCAGTTAATCTTTTCCTATCTTATGCTGACGAGAGCATAGATGGTGCTTCCAATGGACTCAAGGATGCGGCTTTAGGTATTGTGAAGGAGTGTGGAAGTTTACCAGTTGCAATTGTAGCAGTGGCAAGTGCACTAAAGTCTAGGCCTTTACAGGAATGGCAGGATAGTTTGAAAAGATTGCAGAATCATGAGGGAATTCACGATGTTCCAGAAGATTTAAAACAGGCTTATAACTCTTTGAGATTAAGCTATGATAATCTCAGGAATGAAAAGGCTCAAAAACTCTTCCTCTTGTGCTCTCTCTTCCCAGAAGATTATGAAATACCTATAGAACTTTTAACCAGGATAGCTATAGGTGTTGGCCTTTGTGGGGAAGCTAACATATACTCTATTGCAAGAAGTCATTTTACTCCAATTAAAAATGAGCTCTTAGATTCCTGTTTGTTATTGAAGGTTGAGAATGAATGTGTCAAAATGCATGACTTGGTTCGGGAGGTAGCTCTATGGATTGGAAACAAACAGATTCAAGCGGGCATCAATTCTAACTCAACTTTAATAGAAAACATCCAATATTCATCTTGGAACATAGTTGACTTTCGGAATCATTTTGATGGCAAAAAGCTTGAGGTTCTTTTACTTTGGATAAATGATGCAAATTCTCCTAGGGTCAAAGTTCCCGATGCTCCCTTTGAAGGGATGGAGAACCTTAAAATTTTGGCTTTAATGAGTTCATCAGATTTGGAAATTTCAGCTGCTTCCTTATTTCAATCACCTTTGTCATTGACAAGTGTTCGAACTTTGGCCATAAAGAATTTTAAGTCATTAGGAGATATATCTATTTTGGCAAATCTAAAAGACCTTGAGAGCCTTGAATTGAACAATTGTTCGATTATTGAATTGCCAAAAGAAATTAAAGAACTTCAAAAATTGAGATTGTTGGAGATGGTGAACTGTTCTTTTACTGGAAGAAATAATCCTTTTGAAGTGATTGGAAGTTGCTTTCAGTTACAGGAGCTGTATTATGCTTCAAATCATGTGGATGATGATGACAGGCAAATTACAACACTTCCTAGATTGCAAAGGTATCACATAAGGGGTCCGGTTTATTTTAGTGATTATAAAGTGGATTTTTTAATACCTAGATATTTTGATTCACGGGACTTAAGAGTAGACTTCACCAACGAAATATTTAAACTCCTAGTGGCAAGAGCAGAAGTTTTGATTTTAGGAGGAGATTACCACAACAGAGGATGGACAAATATTGTTCCGGACATCTTATCTGTGGAGGATGACAACATGAAAGATCAATTAACTAGGTTCTCTTTGCATTCAATGAATGAGATAAAGTGCCTAATCCATACCGAGAATCTTCGACCTGGTGTGGCTATCTTCTCCAAGTTGGTTGAACTGATGCTTTCTTCTGTGGATGTGAGAGAACTATGCCATGGGCCTTATCCTGTTGACTTTTTGAAGCAATTGAAGGAGTTGCATTTATCTACATGTGAAAAATTGGAAGGCACGTTATTTGATGGCAAGTTAGAGCTGTGTAATCTTAAGTCCATATATTATATAATGTTCAATGACATGCCTTTTTCATGCATCCACAACACAGAGTCTAAAGCAGTTGGAAAAACTGGAAATTAG 2565 0.3899 MAAIGEGVATHVAESLVDKPMKELKYLCCYKTYVDDFEEEKTSLSAKRNTVLKNIKEANHRNENQVEDEVELWLGRAKDLIEEDTKGKKKWFGLATNCFWQYKRGKELEGKTQKIKRLMEQSNFARVARSTGLPGIGFYSSPNFITFEDRKLISQKLKEALNDDNNFMIGLYGLGGTGKTTMAIEVGKDVAESKLFDKVIFSVVSKDVSLKKIQGNIAKQLDLPLTEGMDESEQAQELWKRIAEGGEKVLIILDDMWEKLTPRDIGIPLGRHGKGHCAVLLTTRDWRVCRGMGCHETIELKVLNDEDAVNLFLSYADESIDGASNGLKDAALGIVKECGSLPVAIVAVASALKSRPLQEWQDSLKRLQNHEGIHDVPEDLKQAYNSLRLSYDNLRNEKAQKLFLLCSLFPEDYEIPIELLTRIAIGVGLCGEANIYSIARSHFTPIKNELLDSCLLLKVENECVKMHDLVREVALWIGNKQIQAGINSNSTLIENIQYSSWNIVDFRNHFDGKKLEVLLLWINDANSPRVKVPDAPFEGMENLKILALMSSSDLEISAASLFQSPLSLTSVRTLAIKNFKSLGDISILANLKDLESLELNNCSIIELPKEIKELQKLRLLEMVNCSFTGRNNPFEVIGSCFQLQELYYASNHVDDDDRQITTLPRLQRYHIRGPVYFSDYKVDFLIPRYFDSRDLRVDFTNEIFKLLVARAEVLILGGDYHNRGWTNIVPDILSVEDDNMKDQLTRFSLHSMNEIKCLIHTENLRPGVAIFSKLVELMLSSVDVRELCHGPYPVDFLKQLKELHLSTCEKLEGTLFDGKLELCNLKSIYYIMFNDMPFSCIHNTESKAVGKTGN 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1750g00002 854 Gene3D - 140 301 IPR027417 -
Pral1750g00002 854 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 815 - -
Pral1750g00002 854 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Pral1750g00002 854 Gene3D - 302 389 IPR042197 -
Pral1750g00002 854 Pfam NB-ARC domain 154 393 IPR002182 GO:0043531
Pral1750g00002 854 PRINTS Disease resistance protein signature 243 257 - -
Pral1750g00002 854 PRINTS Disease resistance protein signature 589 605 - -
Pral1750g00002 854 PRINTS Disease resistance protein signature 338 352 - -
Pral1750g00002 854 PRINTS Disease resistance protein signature 168 183 - -
Pral1750g00002 854 Gene3D - 390 473 IPR036388 -
Pral1750g00002 854 Gene3D Ribonuclease Inhibitor 474 849 IPR032675 -
Pral1750g00002 854 SUPERFAMILY L domain-like 465 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1750g00002 Pral-Chr1750 26212 28776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1750g00002 169 483 WRKY Transcription Factor Family AT5G45050 23.988 2.21e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1750g00002 - - pcin:129311690 691.034