Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1749g00007 ATGGCTTCTTCTTCCCACCAGTCTCTCCTTCACAAACCCAAAAAATCCATTTCCAGAACCATCTTCCTCGCTCTCTCTCTAGCTGCTCTCATAGGCTGCTCAGCCGTTGTTGCCTCTACTCTCTTCACACCCTCCTCCTCCTCCTTCGTCAACCTCTTCCACCCTCTGCATCATCATCTCTGTGATCATGCCCTTCACAAATCATCATGCCTTGCCCACGTCTCTGAGTTAACTAAAGATTCAGCCTTTAACGACCAAAAATCCAAATTGCTTCAATCTTTTCTGATCAAATCCACCTCACAAATTCAGAAAACCGTGGACTCAACCAAAGCCATCAAACACAGGATCAATGATCCAAAACAGCACCAAGCTCTGCTTGTCTGTGAGCAACTTCTGGACTCTTCCCTTCATAGAGTTTGGGACTCTGCGGTGGCCCTCACAGAAAACACAACCAAATCCTACCAGGATGCTCACACATGGCTCAGCACTGTCCTCACTAACCACATCACTTGCTTGGATGAGCTAGAGGGATCAGGTCGAGCCCTTATAGAGTCTGAGCTCAATGACTTAGTCGCCAGAGCAAGAACCTCCCTAGCCATGCTTGTTCATGTCATGCCCTCTAAAATTGAAACTATTAAGGAGCCACTGAATGGGGAGTTTCCCTCATGGGTGACCAGTAAGGATAGGAAGCTTCTGGAGGCTTCTGCAAATGATATAAAGGCTAACGTTGTGGTGGCCAAGGATGGAAGTGGCAGGTTTAAAACAGTGAAGGAGGCTGTGGCTGCGGCACCTGATAACAGTAAGACGAGGTATGTAATATATGTGAAGAAGGGAGTTTATAAAGAGAATGTTGAGATTGGATCCAAGAAGAAGAATGTGATGCTGGTGGGTGATGGTATGGATTCCACTATCATCACTGGAAGCTTGAATTTCATCGATGGAACACCCACCTTCAGAACTGCCACCGTCGCTGCGGTTGGGGATGGATTCATAGGCCAAGACATATGGTTCCAGAACACGGCAGGCCCACAGAAGCACCAAGCGGTGGCTCTCCGCGTCGGCGCCGACCTCTCCGTCATCAATCGCTGCCGTGTCGACGCCTTCCAAGACACTCTCTACGCCCACTCCAACAGGCAATTCTACCGTGACTCCTTCATCACAGGCACCGTCGACTTCATCTTCGGCAACGCCGCAGTTGTGTTCCAAAAGTGCAACCTCGTGGCCCGAAAGCCAGAGGCTAAACAGAACAACATGGTCACAGCTCAAGGACGCGAAGACCCAAACCAGAACACAGGAACTTCCATCCAGCAATGTAACCTAACACCAAGCTCCGATCTCAAGCCCGTCGTGGGCTCAGTCAAAACCTTTCTGGGTCGTCCATGGAAGGAATTCTCTCGAACTGTCGTGATGCAGTCATTCCTGGATAGCCATATTGACCCATCAGGATGGGCTCCATGGGACGACAAGCAATCCACGCTGAAGAATCTGTATTATGGAGAGTACATGAACAAAGGACCTGGTGCTGGGACTTCCAAGAGAGTGAAATGGCCTGGGTTTCATGTGATTACAAGTGCCGCTGAGGCTAGCAAATTCACAGTGGCTCAGCTCATTCAAGGAGGAACTTGGTTGAAGGACACTGGGGTCGCCTTCACTGAAGGACTATAG 1665 0.4955 MASSSHQSLLHKPKKSISRTIFLALSLAALIGCSAVVASTLFTPSSSSFVNLFHPLHHHLCDHALHKSSCLAHVSELTKDSAFNDQKSKLLQSFLIKSTSQIQKTVDSTKAIKHRINDPKQHQALLVCEQLLDSSLHRVWDSAVALTENTTKSYQDAHTWLSTVLTNHITCLDELEGSGRALIESELNDLVARARTSLAMLVHVMPSKIETIKEPLNGEFPSWVTSKDRKLLEASANDIKANVVVAKDGSGRFKTVKEAVAAAPDNSKTRYVIYVKKGVYKENVEIGSKKKNVMLVGDGMDSTIITGSLNFIDGTPTFRTATVAAVGDGFIGQDIWFQNTAGPQKHQAVALRVGADLSVINRCRVDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPEAKQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSVKTFLGRPWKEFSRTVVMQSFLDSHIDPSGWAPWDDKQSTLKNLYYGEYMNKGPGAGTSKRVKWPGFHVITSAAEASKFTVAQLIQGGTWLKDTGVAFTEGL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1749g00007 554 FunFam Pectinesterase 236 554 - -
Pral1749g00007 554 PANTHER PECTINESTERASE 36 544 - -
Pral1749g00007 554 Gene3D Invertase/pectin methylesterase inhibitor family protein 58 204 IPR035513 -
Pral1749g00007 554 Pfam Plant invertase/pectin methylesterase inhibitor 58 200 IPR006501 GO:0004857
Pral1749g00007 554 CDD PMEI-like_4 68 202 - -
Pral1749g00007 554 NCBIfam pectinesterase inhibitor domain 34 180 IPR006501 GO:0004857
Pral1749g00007 554 Pfam Pectinesterase 242 539 IPR000070 GO:0030599|GO:0042545
Pral1749g00007 554 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 199 IPR035513 -
Pral1749g00007 554 ProSitePatterns Pectinesterase signature 1. 267 286 IPR018040 -
Pral1749g00007 554 ProSitePatterns Pectinesterase signature 2. 386 395 IPR033131 -
Pral1749g00007 554 Gene3D - 236 554 IPR012334 -
Pral1749g00007 554 SUPERFAMILY Pectin lyase-like 240 553 IPR011050 -
Pral1749g00007 554 SMART PMEI_2 45 200 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1749g00007 Pral-Chr1749 58767 61222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1749g00007 3 554 Carbohydrate Esterase AT1G11580 56.172 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1749g00007 K01051 - gmx:100815836 794.267