Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1747g00005 ATGGATGGCATCCCTGCTAAACTTGTAGAGAACGAAGCCCAAAGTTTAGTGAACTTGCACTACTGGACACGTGAAGCTGAAGAACTCATTGATGCTGACACTAAGAAAGAGAATTGCTTTAATGACTTGTGTATTAATTGCTGGCGTCAATATCAAAAAGGCAAAGACTTGGCAAAACGAACTCTAGATATTGACAAACTTCTAGAGAGAAGTAACTTTGATATAGTGGCAGGTCCAACTAATCTTCCAGGTATAAAATATCATTGCTTGGAAAATTTCATGCATTTTGAGAGCAGAAAGTCAATATTTAAAGAACTTAAAAAGGCACTAGAAGATGAAGAAAACAATATGATTGGATTGCAAGGCTTGGGGGGAACAGGCAAAACCTCGATGGCAACAAAAGTAGGTGCTGAATTAGAAGGATCCATATTCGGAAAAGTCATCTTTCTTGTTGTCTCTAAGCGTCCAGAGTTCAAAGAGCTTCAAGGTGAAATTGCTAGGAATTTGGGTTTGGAATTAAAGAATGGAGCAGAAGAAGTACTCCATGATAAAATATTGGCCAAAATCAAAGCATTAAATGAAAAACTTCTTATAGTGCTAGATGACGTGTGGATGGAGTTTAATCTCACGAAAGAGTTGGGGATTCCTCCTCGCCACTTGCACAAGGGTTGCACTATATTGATAACCACCCGGAGCAAAGAGATTTGTACAAAAATGGATTGTCAAGGGATCATTGATCTACATAAATTGACTGATAAGGAAGCATTGTCACTTTTCCTCGAGCATACTAATAGCTCCTCTACTTTGGAGAGTTTGGCACAAAATATTGTGGACCATTGCCATGGAGTACCAGTTGTAATTGTAGCTGTAGCAAGATCATTAAAAGGGCGACCTTCTTTAGTTTGGAAGGAAGCGTTGAGGAACTTGCAAAGAGGTGAGTCAATATTTAAGGTTCGTGATGATGATTTAAAAGGGGTCTATGAAGGTTTGAAATTGAGCTATGATAATTTGAAAAATAAAAAATCCAAAAGGCTCTTATTGATATCTTCCCTATTCCGCGAAGATTTTGAGATTCCTATGGAGTTTTTAATCAGAATTGGTGTGGGAATGGGTCCTTTTGAGGAAGCTGATGACTACAATGAAAGAAGAAGAAAAGTACTTGATGCTATAGTGGAACTCCTAGATTCTTCTTTATTATTGAATGCGGAGAGGGAATGTGTAAAGATGCATGATTTGATTCATGAAGTAGCCTTATCAATAGGAGAAAAGGATGTTCAATCTGTCATTGAATCTAAACCGCCTAAAGAGGGCTTGCAATGTTTATTTTGGAAAAGCAATTCTTTTCCAAGACACTTTGATGGTAGAAACCTTGAGGTTTTACTTTGGGTTCTAGATAACTCGGAGGATTTGGAAGTCCCTGATATGTTCTTTACAGTGATGAAAAGGCTCAAAGTTTGGTTTCTATTGAGTGCAGCTGACAATCGAATTTCAGCTCAATTACTATTTTCATCAATTCAGTCATTACAAAATATTCGAACTCTCATAATAGGAAATTTTGAATTATGCAACAGCATCTTTATGTTGGGAGGGTTACCAAATCTTGAGAGTCTATGGTTCCATGATTGTTCAATTATTAAGCCTGGAGAAAATTTTGGGCTAGAGAAGTTGAGATTCTTAAGGATAGAAAATTGTAAAATCACTATGAGTAATCCTTTTGAATTGATTGAAGCATGCCCAAATCTAGAGGAGTTGAATTTTTTGAATAATGAGTATGATGAGGAGGAAATAGCAAATACAATTTCTCATGTGAAATGTGCATCTTTTCATACATTACAGATATATCAAATATCTTGTCATGGTCAGGATGAATTTTTAAATTATTTTGAGCAATGTGGTTCCCTGTCAAGATGCTTTAAGCCAAGTTATTTAAGGCATTTCATCTCTGAGGCAACATTTAAACAACTTGTTAAAACAGCTGAGCTTCTCATGTTAGAAGGTCATGGAGAAACAAAACAGAAAAATCTTGTCCCTGATATTGTTCCAGTAGACAACAAAGGCATGACTGACTTGATCATTCTTCAATTGGATTCTTGGCGTGACATGCGATGTCTCATTGATGTTGCGAACAATCATCTTGATGTGAAGAATGCTTTTTCCAATTTAGTTGGACTATATCTTTCTGAAATGGGACTAAGCAATATATTATTTAATGGCCACTATAACCTGTGTCATCTGAGGACCTTGAAACTGAACGGGTGTCCAAAGCTGACGTCAATTTTCCTCCCATCCACTGCTCAAAGGCTTTTACAGTTAGAAGAGTTGAACATTGAGGGATGTGATGCATTGGAATGCATTGTAGAAGATAAGAGTTCAAGAGGGGAAATAGTTGGTGGTGATGGTGACAATGATCAAAAGAGCTACGACACTCTGTTTCCAAAGTTTAAAATTCTTGAAATTGATAGGTGTGACAATTTAGAAATAATATTGCCAATCCTTCAAGGTGGATGGCCTCTGGAAAGAATAATCATACAGCAGTGCAAGAAGTTGAAATATATATTTGATAAGTTCCAAGAGGTCAATGTTATGCTCCCCTCTCCGGAAAGAATGCATCTTCTTAGTCTATCAAGTCTGGTTGGTGTTTTCAGGGAGTATGAAAAATCCACCTCTTCGTCACCACAACGGCTAGCACCCACACCTCAAAGCAGCAAGATACATTCTTTTTCTTGGGGTCAAGTATGTTGTTTTAAATCAAAGGCCACAAGTGAAGAGGCTGATGTTGCTGTTTCTACGGGGAGATTGCTTGACGAAGAAATCTCACGGGGATTACTTGCATCTAAGAAATGGATTGATAATGCTCCTACACTTGGGAGGCAACTAGCACTCCATGTTGTTGGTCATATCAGGAAGATGGAACTTGCATATCTCTCTTCAAATTCACTATCAACTTTGTTCACTTTATCCATGGCATCAGTGATATCATGGGAAGAGATGACAATCAGGGGTTATGATGGGCTAAAGCACTTGGTAACGAGCGAGGAGGATGATTATAAAGATCAAATCAACTGTAGTTCCATTTTCCCAAAGTTACAGAAACTTTATATCTCACGGTGCAGGGACTTGGAATTTTTATTTCTGTCTGCAATATCTATAGAAATTAAGAATTTAAAGTCCTTGACTATTGAAGGTGCTCCTAAGCTAACATATGTCATTCAGAAATACCAGCATCAGCATCGTTTATCTGATCAAAATCAAAATGACGAGTGGCACTTTGATCTCCCTGCTTTGGAGGTCCTCTGTTTAGAGAAAGTACCTAAGTTCATCGACATTGGTCCCATGAATTATAAAATAGTGTCACCATCTCTACCACACGTTTGTTCAGACAAAGCACAACTGAATTTGAATACCACAAAGTTGGATAAAGAGAGTGTAAAAATACAGTCAGATGAAAATTGA 3453 0.375 MDGIPAKLVENEAQSLVNLHYWTREAEELIDADTKKENCFNDLCINCWRQYQKGKDLAKRTLDIDKLLERSNFDIVAGPTNLPGIKYHCLENFMHFESRKSIFKELKKALEDEENNMIGLQGLGGTGKTSMATKVGAELEGSIFGKVIFLVVSKRPEFKELQGEIARNLGLELKNGAEEVLHDKILAKIKALNEKLLIVLDDVWMEFNLTKELGIPPRHLHKGCTILITTRSKEICTKMDCQGIIDLHKLTDKEALSLFLEHTNSSSTLESLAQNIVDHCHGVPVVIVAVARSLKGRPSLVWKEALRNLQRGESIFKVRDDDLKGVYEGLKLSYDNLKNKKSKRLLLISSLFREDFEIPMEFLIRIGVGMGPFEEADDYNERRRKVLDAIVELLDSSLLLNAERECVKMHDLIHEVALSIGEKDVQSVIESKPPKEGLQCLFWKSNSFPRHFDGRNLEVLLWVLDNSEDLEVPDMFFTVMKRLKVWFLLSAADNRISAQLLFSSIQSLQNIRTLIIGNFELCNSIFMLGGLPNLESLWFHDCSIIKPGENFGLEKLRFLRIENCKITMSNPFELIEACPNLEELNFLNNEYDEEEIANTISHVKCASFHTLQIYQISCHGQDEFLNYFEQCGSLSRCFKPSYLRHFISEATFKQLVKTAELLMLEGHGETKQKNLVPDIVPVDNKGMTDLIILQLDSWRDMRCLIDVANNHLDVKNAFSNLVGLYLSEMGLSNILFNGHYNLCHLRTLKLNGCPKLTSIFLPSTAQRLLQLEELNIEGCDALECIVEDKSSRGEIVGGDGDNDQKSYDTLFPKFKILEIDRCDNLEIILPILQGGWPLERIIIQQCKKLKYIFDKFQEVNVMLPSPERMHLLSLSSLVGVFREYEKSTSSSPQRLAPTPQSSKIHSFSWGQVCCFKSKATSEEADVAVSTGRLLDEEISRGLLASKKWIDNAPTLGRQLALHVVGHIRKMELAYLSSNSLSTLFTLSMASVISWEEMTIRGYDGLKHLVTSEEDDYKDQINCSSIFPKLQKLYISRCRDLEFLFLSAISIEIKNLKSLTIEGAPKLTYVIQKYQHQHRLSDQNQNDEWHFDLPALEVLCLEKVPKFIDIGPMNYKIVSPSLPHVCSDKAQLNLNTTKLDKESVKIQSDEN 1150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1747g00005 1150 Gene3D Ribonuclease Inhibitor 418 652 IPR032675 -
Pral1747g00005 1150 Coils Coil 103 123 - -
Pral1747g00005 1150 Gene3D Ribonuclease Inhibitor 671 865 IPR032675 -
Pral1747g00005 1150 Gene3D Ribonuclease Inhibitor 955 1111 IPR032675 -
Pral1747g00005 1150 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 838 1085 - -
Pral1747g00005 1150 Pfam NB-ARC domain 104 336 IPR002182 GO:0043531
Pral1747g00005 1150 Gene3D - 88 245 IPR027417 -
Pral1747g00005 1150 Gene3D - 249 339 IPR042197 -
Pral1747g00005 1150 PRINTS Disease resistance protein signature 280 294 - -
Pral1747g00005 1150 PRINTS Disease resistance protein signature 117 132 - -
Pral1747g00005 1150 PRINTS Disease resistance protein signature 190 204 - -
Pral1747g00005 1150 PRINTS Disease resistance protein signature 740 756 - -
Pral1747g00005 1150 SUPERFAMILY L domain-like 408 1070 - -
Pral1747g00005 1150 Coils Coil 1143 1150 - -
Pral1747g00005 1150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 92 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1747g00005 Pral-Chr1747 182852 187184 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1747g00005 118 426 WRKY Transcription Factor Family AT5G45050 22.884 5.41e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1747g00005 - - pcin:129313598 931.013