Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1746g00009 ATGGAGAATGTTGTGGGGCTGTGTAAGGAAGAAGAGAAAATGAATTTGCCTCCTGGTTTTCGGTTTCATCCGACTGATGAAGAGCTTATAAGTCAGTACCTGTACAAGAAGGTCACTGATTCCAACTTCTCAGCTAGGGCCATTGGGGAGGTGGACTTGAACAGGTCTGAGCCTTATTTGCCATGGAAAGCCAAAATGGGAGAAAAGGAGTGGTACTTCTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGGGCCACTGAAACAGGATACTGGAAAGCCACAGGGAAAGATAAAGAGATCTACAGAGGAAAATCGCTGGTTGGAATGAAGAAAAAACTGGTTTTCTACAGAGGAAGAGCACCCAAAGGAGAGAAAACCAACTGGGTCATGCACGAATACAGATTAGAGGGTAAATTCTCCGTCCACAACCTCCCTAAAACCGCGAAGAATGAGTGGGTGATATGCAGGGTTTTTCAAAAAGGTTCGAGTGGTAAGAAAACCCATATTTCTGGGATGATGAGGCTGGATTCTCTTGGGAATGAATTGGGTTCTTCTGGCTTACCTCCATTGACAGATTCGTCACCTTTCCCTGGCAACAAAACCAAACCTGTCGCAGAATCGGCTTACGTGCCCTGCTTCTCCAATCCAATCGATGCTCAGATCAGAAACAACCAAGGAGGGATCTTTGATTCCTACAGCAACTTCCCTAATTATGGGGTTTCTTCGAATCCCTCAGACACCCTTCCCAGAATCCCAATTTCTGGTTCGTTATATTCCACTCAACCACATCAAGCTCCTTCAAGTTTAGCTCTACCCAATTCTATTTATGGCCTGCAAGACCAGACCCTCCTCAGGGCCTTGCTTGAAAACCAAGAATCAAACAGGAACAATTTCAAGCCCGAGAGGGACATGGTCAGTGTGTCCCAAGAAACAGGTCTTACCACTGACATGAACCCCGAAATCTCCTCGGTCGTGTCGAATCTTGACATGAGTCGCAGAACCTTCGACAATCAGCAGCCGCAACCAACTGCCTCATCTGCAGCAATGGACTATGAAGGTTTGTGGACTTACCGAGTTTAA 1095 0.4621 MENVVGLCKEEEKMNLPPGFRFHPTDEELISQYLYKKVTDSNFSARAIGEVDLNRSEPWXLPWKAKMGEKEWYFFCVRDRKYPTGLRTNRATETGYWKATGKDKEIYRGKSLVGMKKKLVFYRGRAPKGEKTNWVMHEYRLEGKFSVHNLPKTAKNEWVICRVFQKGSSGKKTHISGMMRLDSLGNELGSSGLPPLTDSSPFPGNKTKPVAESAYVPCFSNPIDAQIRNNQGGIFDSYSNFPNYGVSSNPSDTLPRIPISGSLYSTQPHQAPSSLALPNSIYGLQDQTLLRALLENQESNRNNFKPERDMVSVSQETGLTTDMNPEISSVVSNLDMSRRTFDNQQPQPTASSAAMDYEGLWTYRV 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1746g00009 365 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Pral1746g00009 365 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
Pral1746g00009 365 Gene3D NAC domain 25 170 IPR036093 GO:0003677|GO:0006355
Pral1746g00009 365 SUPERFAMILY NAC domain 13 166 IPR036093 GO:0003677|GO:0006355
Pral1746g00009 365 FunFam NAC domain-containing protein 100-like 25 170 - -
Pral1746g00009 365 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1746g00009 Pral-Chr1746 45210 46884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1746g00009 14 363 NAC Transcription Factor Family AT5G07680 59.375 2.56e-130 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1746g00009 NAM 6.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1746g00009 - - qsa:O6P43_022865 565.074