Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1744g00007 ATGGAGTCTGAAGATCAGGCAACATCGTCAGAAACAAACCCAAGCGATGAGCAAGGAGGAAGTCAAGTGACAAGGTCGTACGAATGCACCTTCTGTAAAAGGGGATTTTCCAATGCGCAAGCATTGGGAGGCCACATGAACATTCACAGGAAAGATAAAGCCAGGCTGAAGCAATCTTCCAACCAAGCTCATCGTCACCGTCATCATCGTCAGCCATCTTTGGATGTTCACAGTAAGGTTGAAGACAGAACTCACGGGCCTGCCTGCAATATGGAAGATTCCTCTTCCAGAGACGAAAACTGCTCCGAACTTCGCCTGAAGCAGCTTCCTTTATTTGCAGAAACACCCTGTGGTGAAACAGAAAAGCCAGAAGAATTAGGTCATATTCATGATAGAGGAATTGCTGAAGAAATCAAGGGTTCGCCCTCGGATTTAGACCTTGAACTCAGACTAGGGCCTGACCCACCCTCCCCCACTATTGGCACCCGAAAATTCTTTTGA 501 0.4731 MESEDQATSSETNPSDEQGGSQVTRSYECTFCKRGFSNAQALGGHMNIHRKDKARLKQSSNQAHRHRHHRQPSLDVHSKVEDRTHGPACNMEDSSSRDENCSELRLKQLPLFAETPCGETEKPEELGHIHDRGIAEEIKGSPSDLDLELRLGPDPPSPTIGTRKFF 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1744g00007 166 ProSiteProfiles Zinc finger C2H2 type domain profile. 27 54 IPR013087 -
Pral1744g00007 166 Gene3D Classic Zinc Finger 3 86 - -
Pral1744g00007 166 SMART c2h2final6 27 49 IPR013087 -
Pral1744g00007 166 MobiDBLite consensus disorder prediction 143 166 - -
Pral1744g00007 166 ProSitePatterns Zinc finger C2H2 type domain signature. 29 49 IPR013087 -
Pral1744g00007 166 MobiDBLite consensus disorder prediction 1 23 - -
Pral1744g00007 166 Pfam C2H2-type zinc finger 27 51 - -
Pral1744g00007 166 SUPERFAMILY beta-beta-alpha zinc fingers 25 54 IPR036236 -
Pral1744g00007 166 MobiDBLite consensus disorder prediction 40 102 - -
Pral1744g00007 166 PANTHER OS07G0101800 PROTEIN 5 155 - -
Pral1744g00007 166 MobiDBLite consensus disorder prediction 74 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1744g00007 Pral-Chr1744 25342 25842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1744g00007 20 162 C2H2 Transcription Factor Family AT3G53820 37.580 1.95e-20 80.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral1744g00007 zf-C2H2_6 9.2e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1744g00007 - - pcin:129313190 217.238