Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1738g00006 ATGAGCGAGCTTTTGATCCTGTATCTGCAAAATAATCAGTTGTCTGGTGAAATTCCTTCCTCAATTGGGAATTGCAGTAAATTGCAGGAATTGTTCTTGAATGTGAATCACATTCAAGGGACTCTTCCAGAGACACTGAACAATCTCCATGATATTGTTTATCTGGGCTTTGCTAATAATGATCTTAGGGGTACTATTCCGTTGGGTTCTGGCAGTTGTAAAAATTTGTTTTTATTGGATCTGTCATACAATTTATTCAGTGGAGGTATTCCTTCAAGCTTGGGAAATTGTAGTGGCTTAACAGAATTTTCTGCGGTTAGCAGTGGCTTAACTGGCAGTATTCCATCCTCCATTGGTCTGCTTCGCAAGCTTTCCCTTTTATGGCTTCCTGTGAATCATTTGTCCGGAAAAATTCCTCCGGAGATTGGCAACTGTAAGTCTTTGACACAGTTGCATTTGTATTCCAATCAACTTGAGGGAGAAATTCCGAGTGAGCTGGGAGAGTTGAGTGAATTACAGGATCTTGAACTGTTTTCCAACCATTTGACTGGTGAAATTCCTCTAAGTGTCTGGAAGATTCAAAGTCTTGAGTATATCCTTGTGTACAATAATAGCCTGTCTGGGGAGCTACCTTTGGAGATGACAGAGCTCAACCATCTTAAGAATATCTCATTGTTTAACAACCACTTCTCTGGAGTCATACCTCAAACTTTGGGAATCAGAAGCCGTTTATTACAGTTGGATTTCACGGATAATAAGTTCACCGGTAACATCCCACCGAATCTTTGTTCTGGAAAGAAGTTAACTCTGCTGAATTTGGGCCTTAACCAGCTTCAAGGTAGCATACCTCCAGATGTAGGAAGGTGTACAACTCTCAAAAGGTTGATTCTGAAGGAGAATAATTTTACAGGGCCCTTACCTGATTTTGAGTATAATCCAAATCTCACGTTCATGGATATCAGTGGAAACAATATCAATGGCTCAATCCCACCAAGTTTGGGAAACTGCTCAAATGTCACTGATTTAATTTTGTCCAATAACAACTTGGAGGGGCATATACCCCCAGAGCTAGGTCACCTTGCAAACCTGAAGACTCTGCATCTTGCTCACAACCACCTAGAAGGTCCTTTGCCACATGAGCTGTCAAAATGTACTAAAATGGACAGTTTTGATGTGGGATCCAATTTCCTGAACGGTCCATTTCCACCAAGTTTGAGGAGCTGGATGGTGCTAACCACGTTAATTCTGAGAGAGAATCGTTTCCATGGGGGTATCCCGGATTTCTTGTCAGAATTTAACAAGCTCTCTGAGCTACAGCTTGGTGGAAATATGCTTGGAGGAAAAATTCCAGGATCACTTGGGGTGTTGCAGAATCTGCGCTATGGGTTGAATCTAAGTGCTAATGGGCTGATTGGTGAAATTCCTCCAGAGATGGGAAAATTATCAAATCTGCTAACTCTGGATCTATCTGGGAACAATTTGACTGGAAGCATACGAGTTCTTGCTGACCTTTCTTCATTACTTAAAGTCAATGTTTCATACAATTCCTTTGATGGTCCTGTACCAAAGATGCTGATGAAGCTGCTTAATTCTGATCCTTCTTCATTTTTGGGGAATCCTGGCCTGTGTGTCAGTTGTTTATCATCAAACAGATCGGATTGCAATCAGAGCAGCCATCTAAAGCTATGTGATGATAGATTGACAAACCAGAAAGGGCTTAGTAAAGTACAAGTAGCAATGATAGCACTTGGATCGTCAATATTTTTTGTTCTTTTGCTGCTGGGAGTAGTCTATATGTGTGTCTGTGGCAGAAAACCTAAGCAGGGAGTCCAGATTTCTGACAAAGAAGGCACTTCCTCACTTCTTAACAAAGTGATGGAGGCTACTGCTAACCTGAGTGACCGGTTTATCATCGGTAAAGGAGCGCATGGAGTAGTTTATAAAGCTTCAGTAGATCCAGGCCAGGTTTTTGCTGTGAAGAAGCTTGCATTTTCTGGGAACAAAGGCAAGAGCAAAAGCATGGTTAGAGAAATTCAAACCGCTGGAAAGATTAGGCACCGAAATCTGGTCAAATTGGAAGACTTCTGGTTGAGAAAAGACTTTGGTCTGATCTTGTACACCTACATGCCAAATGGAAGCCTTCATGAAGTTTTGCATGAAAAGCGTCCACCGCCATCCTTAGAGTGGAATGTGCGATATAAGATAGCCATTGGCATTGCTCATGGATTGGCCTATCTCCATTATGATTGTGATCCCCCCATAGTACATCGTGACATCAAACCAAAAAACATACTCATAGATTCTGATATGGAGCCTCACATTGCTGATTTTGGTATCGCCAAGCTCTTGGATCAATCTTCTGTTTCAGCATCATCTATGTCTGTCCGTGGCACAGTAGGTTATATTGCACCAGAGAATGCATATTCAACAGCAAACAATAGAGAATCTGATGTTTACAGTTATGGGGTAGTTTTACTTGAGTTGATAACCAGAAAGAAGGCAGTGGATCCATCATTTATGGAGGGAGTTGATGTAGTGGTGTGGGTCAGAGCTCTGTGGGACGGAACAGAAGATGTTCATAAAATTGCTGATTCAAGTCTTGCTGGGCAGTTTCTGGATTCAAATGTTCTTGAACAAGCTACCAAAGTGCTTTTGGTGGCTCTGAAATGCACTGAGAAGGATCCACGCGTGAGACCCACGATGAGAGATGTTATCAAGCTATTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGCTTCCAAGTTCCAGCTTCTTAATCCGTAGTTGA 2790 0.4176 MSELLILYLQNNQLSGEIPSSIGNCSKLQELFLNVNHIQGTLPETLNNLHDIVYLGFANNDLRGTIPLGSGSCKNLFLLDLSYNLFSGGIPSSLGNCSGLTEFSAVSSGLTGSIPSSIGLLRKLSLLWLPVNHLSGKIPPEIGNCKSLTQLHLYSNQLEGEIPSELGELSELQDLELFSNHLTGEIPLSVWKIQSLEYILVYNNSLSGELPLEMTELNHLKNISLFNNHFSGVIPQTLGIRSRLLQLDFTDNKFTGNIPPNLCSGKKLTLLNLGLNQLQGSIPPDVGRCTTLKRLILKENNFTGPLPDFEYNPNLTFMDISGNNINGSIPPSLGNCSNVTDLILSNNNLEGHIPPELGHLANLKTLHLAHNHLEGPLPHELSKCTKMDSFDVGSNFLNGPFPPSLRSWMVLTTLILRENRFHGGIPDFLSEFNKLSELQLGGNMLGGKIPGSLGVLQNLRYGLNLSANGLIGEIPPEMGKLSNLLTLDLSGNNLTGSIRVLADLSSLLKVNVSYNSFDGPVPKMLMKLLNSDPSSFLGNPGLCVSCLSSNRSDCNQSSHLKLCDDRLTNQKGLSKVQVAMIALGSSIFFVLLLLGVVYMCVCGRKPKQGVQISDKEGTSSLLNKVMEATANLSDRFIIGKGAHGVVYKASVDPGQVFAVKKLAFSGNKGKSKSMVREIQTAGKIRHRNLVKLEDFWLRKDFGLILYTYMPNGSLHEVLHEKRPPPSLEWNVRYKIAIGIAHGLAYLHYDCDPPIVHRDIKPKNILIDSDMEPHIADFGIAKLLDQSSVSASSMSVRGTVGYIAPENAYSTANNRESDVYSYGVVLLELITRKKAVDPSFMEGVDVVVWVRALWDGTEDVHKIADSSLAGQFLDSNVLEQATKVLLVALKCTEKDPRVRPTMRDVIKLLEDANPRTRSKKLPSSSFLIRS 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1738g00006 929 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 244 909 - -
Pral1738g00006 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 754 766 IPR008271 GO:0004672|GO:0006468
Pral1738g00006 929 ProSiteProfiles Leucine-rich repeat profile. 483 505 IPR001611 GO:0005515
Pral1738g00006 929 ProSiteProfiles Protein kinase domain profile. 632 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00006 929 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 211 - -
Pral1738g00006 929 Pfam Protein kinase domain 637 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00006 929 SMART LRR_typ_2 145 169 IPR003591 -
Pral1738g00006 929 SMART LRR_typ_2 1 25 IPR003591 -
Pral1738g00006 929 SMART LRR_typ_2 266 289 IPR003591 -
Pral1738g00006 929 SMART LRR_typ_2 360 384 IPR003591 -
Pral1738g00006 929 SMART LRR_typ_2 481 508 IPR003591 -
Pral1738g00006 929 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 266 552 - -
Pral1738g00006 929 SMART serkin_6 632 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00006 929 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 599 708 - -
Pral1738g00006 929 Gene3D Ribonuclease Inhibitor 404 552 IPR032675 -
Pral1738g00006 929 Gene3D Ribonuclease Inhibitor 310 403 IPR032675 -
Pral1738g00006 929 SUPERFAMILY Protein kinase-like (PK-like) 621 908 IPR011009 -
Pral1738g00006 929 Gene3D Transferase(Phosphotransferase) domain 1 709 923 - -
Pral1738g00006 929 Gene3D Ribonuclease Inhibitor 1 151 IPR032675 -
Pral1738g00006 929 SUPERFAMILY L domain-like 2 259 - -
Pral1738g00006 929 SUPERFAMILY L domain-like 267 523 - -
Pral1738g00006 929 Gene3D Phosphorylase Kinase; domain 1 600 708 - -
Pral1738g00006 929 ProSitePatterns Protein kinases ATP-binding region signature. 638 661 IPR017441 GO:0005524
Pral1738g00006 929 Gene3D Ribonuclease Inhibitor 152 308 IPR032675 -
Pral1738g00006 929 FunFam Serine/threonine-protein kinase-like protein CCR4 709 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1738g00006 Pral-Chr1738 133499 137549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1738g00006 3 917 Receptor kinase-like Gene Family AT1G73080 53.730 0.0 942
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1738g00006 Pkinase 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1738g00006 - - gmx:100778035 1301.58