Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1738g00004 ATGAAGCTGCTATTATTTATCCTATGCTGGTCTGCTTCTTTCTATGGTACTTCTACCTTGAGTTTGGATGGGTTGACTCTATTATCACTACTGAAACGCTGGACTTCCGTGCCTCCTTCCTTAAATTCAAGATGGAAGTCCTCTGATTCTACCCCTTGTTCATGGCCAGGGATACAATGTGACCGTTACCAGAATGTGGTCTTTCTAAACCTCACCGCATCTCAGATTTTTGGTCACCTTGGGCCAGAAATCGGACAGCTGACTCACTTGCAGAAACTTCTGTTGGCCACAAATGGTTTCTCAGGTACAATACCCCCACAGATATGTAATTGTCGTCTGCTTGAGTACGTTGATCTTTCTGAGAATCATTTGTCAGGAAATATACCTTCAGAAATTGGTAATTGCAAATCTTTGAAGTCGTTACAATTATATTCCAATCAACTCGGAGGAGCCATTCCAAATGAATTGGGAAGCCTAAGTAAAATGGAGGACATTAAATTGTATTTCAACCACTTGACTGGTGAAATTCCACTTGCCATTTGGAAGATTCAGAGTCTTAAGCATATCCTTCTTCATAACAATAGCCTTTCAGGGAAATTACCTTCAGAGATGACAGAACTCAAGCATCTGAAAAACATCTCATTGTTTGACAACCAATTCTCTGGACCAATTCCTCAAAGCCTGGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAATCAGTTTACTGGTGGCATCCCCCCAAATCTTTGTTTTGGAAAGCAACTCCGCACACTGCTTTTAGGTCATAATCAATTTCAAGGGGGCATACCTCCAGATTTGGGAAGATGTGCAACTCTTGCAAGGTTGGATCTCAGTGACAATAATCTTTCTGGGCCTATTACTAAATTTGAAGGTAATAAGGATCTCATGTACATGGACATGAGCAAGAACAACATCAGTGGAGAAATTCCATCTACTTTGGGAAGCTGCACAAATCTCATTGGTTTAATTCTGTCCACAAATAACATCACAGGGCTTATACCCTCAGAGTTAGGAAACCTTTTGAACCTTCAGGTTCTGAATCTTGCTCACAATAATCTAGTCGGTACTTTGCCGCTGCAACTGATGTACTGTACCAAAATGTTTACATTTGACGTGGGATTCAATTTTCTTAATGGTACATTCCCATCAAGCATGAGGAGCTGGACAGTTTTGGGCAGATTAATTTTAAGCGATAATAATTTTAGTGGGTTTGTCCCATTTTTCCTCTCAGAGTATGCCCAGCTTCTCGAATTACAACTTGGTGGAAATATGTTTGAAGGGGTAATTCGCCCATCAATTGGATCATTTATTCACTTATATGAGTTGAATCTGAGTTCTAATAAATTAACAGGTGTGATCCCTTCTACATTTAATGGCTTGTCGATGCTTGAAAGCCTGGATTTATCCCTGAACAATTTGACAGGAAACATACAAGCTCTTAGCTTATTTTTTTCATTAACAAAATTCAATATATCTTACAACTCATTTTTTGGTCCTTTACCAGAAGGGGTAACGGGATCCCCATCATCTTTCTTGGGAAATCTTGGCCTCTATGTTGTCTCGGGTTACAAAAGCGACTCTGAATCAACAGACCACAAAGGCAATAAAAAACCAATTTTCTTTATAGCACTTGGATTCGTAGTGCTTGTCATTTGGTTGTCATTTGTAATTTGCCTCCCATCTGTCACTCTCATCCGCTGGTTTATGCAAATATCTGATGGGGAGGTCAATGGTGACCATGAAGGACAAGAGGATTTGTTTTCAAACGAGGAAGGATTTTCTAGAATTTTTAACCTACTAGATGCTACAGAACAGCTACATGATGAACATATAATTGGTGAAGGAGGGCAAGGAATTGTTTATAAAGCCGAACTTGATATTGGAGTTTTTGCTATTAAGAAGGTTAAATTTGCACAAAGCAATAGGAGGAAACCAAACATGATCAGGGAAATTGAAATGACTAGGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTCCCGGATTGGTGAGGAATATGGTCTAACCATTAGCAGATACATGGAAAATGGAAGCCTTCATGATGTTTTACATGAAAATGTTCCGCTTCCCTACTTAGCATGGAATGTCCGCTATAAAATTGCCATTGGAATTGCAAAAGGACTAGCATACCTCCATCATGATTGTGATCCCCCCATATTGCACAGAGACATCAAACCAAAGAATATACTCCTTGATTCTGATATGCAACCTTGTATTACTGATTTTGGTATTTCGATTGCTTTGAATCAACCCTCTTCTACGGTGCGGCTACGGTCAGCATATCATATAGGTACTCGTGGCTTTATGGCACCAGAGATTGCATGTATGGTAGTGCCCAGCTGTGAGCTTGATGTATATAGCTATGGGGTAGTTTTGCTTGAGCTGATAACTAGAAAGAAAGTATTAGACTCCTCGTTTTTGGAAGAGGAAACCACTTTGGTGGGGTGGTTTAAATCTGTATGGAGGAGAACGAATGAACTTGAAGAGATTGTTGATTCATCCCTTGTAAGGGAGCTTTCAGGTTTAGACGTAAAGGTGCAATTCATCAAAGTGCTTTTGGTGGCTCTAATTTGTACTGAGACAGATCCAGGAAAGAGACTGAAAATGAGGGATGTCATCGAATTCTTTGAAACGCCCACTGATCCAGCATCCTTAAATTCTGAGTTGCTACCATTCTTCCTTTTTATTCTAAACGTTTCTATGCTCCTATTTCCAATCCCCAAGGAGGAAGTCAAGATCACTGCCAATAGAGGTTCTTACCCAATTATTCACAAAGTGATGGCGCACGATGAAAAATTGAACAATTCAAATATTATTGGCAGAGGAGCTCATGGTGTTGTCTACAAATATTCACTGGGAGCATCCCTTGTTTATGCTGTAAAGAAGGTTGCATTTGCTGGTAACAAAAGAAAGATTGTAAAGATAGCCAGAGAAATTGAAATCATTGCAAAGATTAGGCACCCAAATCTAGTCAGATTGCTAGACTTTTTGTTTAAAAAGGACTACTGTCTGATCTTGTACAATTACATGCCAAATGGAAATCTTCATGATGTTTTGCATGAAAAGAATCCACTGCCATGCCTAGAGTGGAATGTCCGGTATAGGATTGCCGTTGGAATTGCTCATGGGTTGGCTTATCTCCATTATGATTGTCATCCTGCCATAGTGCACTGTGCCATCAAACCTAAAAATATACTTCTGGATTCTGATATGGATCCCTGCATTGCTAATTTTGGTATTGCCAAGCTTTTGGATCAGTCTTCTTCAACACCATCTTTAGCAGTTCCAGGAACACAAGGGTATATAACACCAGAGAGTACATATACAACAGCAAATACCAGGGAGTTTGATGTTTACAGTTATGGGATAATTTTGCTTCAGTTGATAACTAGAAAGAAGGAAGTAGATCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTCAGAACTCAATGGAGGGAAACAGGAGCCGTTAGTACAATTGTTGATTCAAGCCTTGCAGAGGAGGTTTTGAAGTCAGATGCACTTGGACGAGTTACCATAGTGCTTTTGCTGGCTTTGAGTTGCACAGAGAAGAATCCACACAAGAGACCCACAATGAGAGATGTTATCAAGCAGTTAGAAGATGCCAATCCAAGGACAAGGAGTAAAAAGCTTCCAAGTTCCAACGCCTTAAAGATTGATTCACACATGTGA 3753 0.3983 MKLLLFILCWSASFYGTSTLSLDGLTLLSLLKRWTSVPPSLNSRWKSSDSTPCSWPGIQCDRYQNVVFLNLTASQIFGHLGPEIGQLTHLQKLLLATNGFSGTIPPQICNCRLLEYVDLSENHLSGNIPSEIGNCKSLKSLQLYSNQLGGAIPNELGSLSKMEDIKLYFNHLTGEIPLAIWKIQSLKHILLHNNSLSGKLPSEMTELKHLKNISLFDNQFSGPIPQSLGINSSLVKLDLMNNQFTGGIPPNLCFGKQLRTLLLGHNQFQGGIPPDLGRCATLARLDLSDNNLSGPITKFEGNKDLMYMDMSKNNISGEIPSTLGSCTNLIGLILSTNNITGLIPSELGNLLNLQVLNLAHNNLVGTLPLQLMYCTKMFTFDVGFNFLNGTFPSSMRSWTVLGRLILSDNNFSGFVPFFLSEYAQLLELQLGGNMFEGVIRPSIGSFIHLYELNLSSNKLTGVIPSTFNGLSMLESLDLSLNNLTGNIQALSLFFSLTKFNISYNSFFGPLPEGVTGSPSSFLGNLGLYVVSGYKSDSESTDHKGNKKPIFFIALGFVVLVIWLSFVICLPSVTLIRWFMQISDGEVNGDHEGQEDLFSNEEGFSRIFNLLDATEQLHDEHIIGEGGQGIVYKAELDIGVFAIKKVKFAQSNRRKPNMIREIEMTRKIRHQNVARCLGSRIGEEYGLTISRYMENGSLHDVLHENVPLPYLAWNVRYKIAIGIAKGLAYLHHDCDPPILHRDIKPKNILLDSDMQPCITDFGISIALNQPSSTVRLRSAYHIGTRGFMAPEIACMVVPSCELDVYSYGVVLLELITRKKVLDSSFLEEETTLVGWFKSVWRRTNELEEIVDSSLVRELSGLDVKVQFIKVLLVALICTETDPGKRLKMRDVIEFFETPTDPASLNSELLPFFLFILNVSMLLFPIPKEEVKITANRGSYPIIHKVMAHDEKLNNSNIIGRGAHGVVYKYSLGASLVYAVKKVAFAGNKRKIVKIAREIEIIAKIRHPNLVRLLDFLFKKDYCLILYNYMPNGNLHDVLHEKNPLPCLEWNVRYRIAVGIAHGLAYLHYDCHPAIVHCAIKPKNILLDSDMDPCIANFGIAKLLDQSSSTPSLAVPGTQGYITPESTYTTANTREFDVYSYGIILLQLITRKKEVDPSFMNGTEIGIWVRTQWRETGAVSTIVDSSLAEEVLKSDALGRVTIVLLLALSCTEKNPHKRPTMRDVIKQLEDANPRTRSKKLPSSNALKIDSHM 1250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1738g00004 1250 Gene3D Ribonuclease Inhibitor 23 179 IPR032675 -
Pral1738g00004 1250 SUPERFAMILY Protein kinase-like (PK-like) 606 894 IPR011009 -
Pral1738g00004 1250 FunFam Leucine-rich repeat receptor-like protein kinase TDR 231 531 - -
Pral1738g00004 1250 SMART LRR_typ_2 256 279 IPR003591 -
Pral1738g00004 1250 SMART LRR_typ_2 446 469 IPR003591 -
Pral1738g00004 1250 SMART LRR_typ_2 87 111 IPR003591 -
Pral1738g00004 1250 SMART LRR_typ_2 350 374 IPR003591 -
Pral1738g00004 1250 ProSiteProfiles Protein kinase domain profile. 616 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 692 903 - -
Pral1738g00004 1250 SMART serkin_6 951 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 SMART serkin_6 616 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 Gene3D Ribonuclease Inhibitor 180 303 IPR032675 -
Pral1738g00004 1250 Pfam Protein kinase domain 617 823 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 Pfam Protein kinase domain 953 1224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 Pfam Leucine rich repeat 448 505 IPR001611 GO:0005515
Pral1738g00004 1250 ProSiteProfiles Protein kinase domain profile. 951 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00004 1250 SUPERFAMILY RNI-like 201 510 - -
Pral1738g00004 1250 Gene3D Ribonuclease Inhibitor 304 543 IPR032675 -
Pral1738g00004 1250 MobiDBLite consensus disorder prediction 1235 1250 - -
Pral1738g00004 1250 Gene3D Transferase(Phosphotransferase) domain 1 692 904 - -
Pral1738g00004 1250 Gene3D Transferase(Phosphotransferase) domain 1 1028 1246 - -
Pral1738g00004 1250 SUPERFAMILY Protein kinase-like (PK-like) 940 1226 IPR011009 -
Pral1738g00004 1250 FunFam Leucine-rich repeat receptor-like kinase 25 131 - -
Pral1738g00004 1250 Gene3D Phosphorylase Kinase; domain 1 940 1027 - -
Pral1738g00004 1250 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1028 1238 - -
Pral1738g00004 1250 Gene3D Phosphorylase Kinase; domain 1 599 687 - -
Pral1738g00004 1250 SUPERFAMILY L domain-like 22 300 - -
Pral1738g00004 1250 ProSitePatterns Protein kinases ATP-binding region signature. 957 980 IPR017441 GO:0005524
Pral1738g00004 1250 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 302 894 - -
Pral1738g00004 1250 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 132 228 - -
Pral1738g00004 1250 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Pral1738g00004 1250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Pral1738g00004 1250 MobiDBLite consensus disorder prediction 1229 1250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1738g00004 Pral-Chr1738 117463 122629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1738g00004 64 892 Receptor kinase-like Gene Family AT1G17750 45.238 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1738g00004 Pkinase 2.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1738g00004 - - pcin:129289575 1678.3