Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1738g00002 ATGAAGCTCCAATTTCTCCTGTTATGCTTGTTTGCCCCTTTATATGTTGCTTCTGCCTTGAGTTCAGATGGGTTGACTCTATTGTCTCTTCTCAACCACTGGACTTCTGCGCCTCCTTCCTTAAAGTTGAACTGGAAGTCCTCTGATTCCACCCCTTGCTCATGGATAGGAATACAATGCAACCGTTACAGCAACGTGGTCTTCATAAACCTCACTGCATCCCAGATAATTGGTCAACTGGGACCGGAAATTGGACAGTTGACTCACTTGCAGAACCTTTCGTTGGCAAGAAATGGATTCTCAGGGACAATACCTGTTAAGCTAGCCAATTGTAGTCTGCTAGTGCATATAGATCTTTCTGAGAACCATTTCTCTGGAAATATACCTCCAGAAATTGGTAATTGCAAATCTTTGCAGTCTCTACGTCTATATTCCAATCAACTCGGAGGAGACATTCCAAATGAATTGGGAAAACTAAGTAAATTGGAGGACCTTGAATTGTATTTCAACCACTTGACAGGTGAAATTCCACTTACTATTTGGAAGATTCGGAGTCTTAGGCATGTTCTTCTTCATAACAATAGCCTTTCAGGGAAATTACCTTCGGAGATGACCGAGCTCAAACATCTGAAAAATATCTCATTGTTTGACAACCAATTATTTGGACCAATTCCTCAAAGCTTGGGAATCAATAGCAGTTTAGTGAAGCTGGACTTGATGAATAATAAGTTAACTGGTGACATCCCACCAAATCTTTGTTTTGGAAAGCAACTCCGCACACTGCTTTTAGGTCTTAATCAACTTCAAGGGGGCATACCTCAAGATTTGGGAAGATGTGCAACTCTTGCAAGGTTGGATCTCAGTGACAATAATCTTTCTGGGCCTCTTCCTAAATTTGAAGGTAGTAATGATCTCATATACATGGATGTGAGCAAGAACAACATTAGTGGAGTAATTCCATCAAGTTTAGGAAACTGTACAGATCTCACTGCATTAATTTTGTCCATGAACAACATTATTGGGCCTATACCCTCAGAGCTGGGAAACCTTTTGCGCCTTCAGGTTTTGAATCTTGCTCACAACAACCTAGAAGCTCCTTTACCACAGCAGCTATCGTACTGTACCCAAATGGATACTTTTGATGTGGGATTCAATTTTATTAATGGTTCATTCCCATCAAGCATGAGGAGTTGGAAAGCACTGACCATATTAATTTTAAGAGAGAACCGCTTTAGTGGGGTTATCCCATCTTTCTTCTCAGAATATGTCCAGCTTCTCGAGCTACAACTTGGTGGAAATATGTTTCGAGGAAAAATTCCCACATCGATAGGATCATTGCAGAATCTGTTATATGGATTGAATTTGAGTGCTAACAAATTAACAGGTGAGATTCCTTTAGAAATTGGGAAGTTGGAAAAGCTGCAAATTTTAGATATATCCTTGAATAATTTGACAGGAAGCATACATGCTCTTGGTGATCTCTCTTCATTGACTGAAGTCAATATATCACACAATTCCTTTGTCGGTGCATTGCCAGAGTGGAACACGCAACATCTGAATTTGCTACCATCATCATTCATTGGCAACCCTGGTCTCTGTGTCCGTTGTTCAACCTCAAATGCCTCCACTTGCAAAAAGCCTAGCTTCTTGAAACCATGTGCTTCTGAATCAACTAATCACAAAGGCAGTAAACGTTCAATCTTATTCATAGCACTAGGATCTGTAGTGTTTGTCATTTGCCTGTCGGTATCACTACTAATTTATGACCACCATTATGGCCAACAATCTGAGGAGGTGGTCCTTGGTCAAGGATTTGAGGAGTACTTGTCTTTTGTGCGGAGACGTATTTACTACAATGATATTGCTCGAGCTCTCATCTTGGGGGAAGGTAATGCTGACTGTGAAGCGCAAGAGGCTTTTGATTCAGATGTCAAAGGAGAATTCAGAATTGTTGACCTAATAAATGCTACGGAGAATCTACATGATCAATATGTGATTGGCGTAGGAGGGCATGGAATTGTTTATAAAGCCGAACTTGATTTCGGAATTTTTGCTGTTAAGAAGGTTGAATTTGCACGGAGCAATCGGAGGAAATTGAATTTGATTAAGGAAGTTGAAATGACTAAGAAGATTAGGCATCAAAATGTGGCAAGATGCCTAGGCTTCTTGATGGGCGAGGAGTATGGTCTAACCATCAGCAGATACAGGGAAAATGGAAGCCTTCACGATGTTTTGCATGAAAGCAATCCAAAACCATACTTAGCTTGGAATGTCCGCTATATGATAGCTATTGGAATTGCAAAAGGACTAGCACATCTTCATCACAGCTGCGATCCTCCCATATTGCATCGAGACATCAAACCAAAGAATATACTCCTGGACTCTGATATGCAGCCTTATATTACAGATTTTGGTATTTCCCTTGCTTTGAATCAGTCATCTACTGTGGTGCGCATGCGGTCAACTTATCATATAGGTACACCTGGTTTTATGGCACCAGAGATTGCCTATGACGTAGTGCCAAGGTGTGAGCTTGATATATACAGTTATGGGGTAGTTTTGCTTGAGCTGATAACCAGAAAGAAAGTATTAGATTCCTCATTTGTGGAGCAGCAAACCACTTTAGCAGGGTGGTTTAAATCTACATGGACAAGAACAAGAACCCTTGAAGAAATTGTTGATTCAAGCCTTACAAGGGAGCTTTCAGATGTACATGTGAAGGCACAAGTTATCAAGACGCTTTTGGTGGCTTTAATATGTGTTCAGAAAGATCCGAGAAAGAGACTGAAAATGATAGATGTTGTTGATTTCTTTGAAACACCCACTGATCCAGCAAATTTTGTTCAACACGACGGAGCTTCGGTTCATTTGGGAATTTCCCTTGCGACCGCTGCGGCCTCTCTATTTTCTGAGGAGAAAGGCGGGATCCTTCCCAATTCAAACAATCGGCATATCGTCCGCAGAGGAACTCCTGGAGTTCTTTCTAAAGTTGAGTTACGTACTGGTGAAGCCGTTTATGTAAAGAAGCTGTTGTCTGCGGGGTATCCCTCAAGTATAACGAGAGAAGAAAAAATGAATAGAACGGTTAAGCACCGAAATATAATTAAACTGCATAGGCTTTGGACAGAAAAAGATGAAACTTTTCTCATGTTCGAGTACTTGTCAAATGGAAGCCTACATGATGTTTTGCATGGAAAGAACCCCCCACCATCCCTGAAGTGGGATGTCAGTTATAGGATAGCTATTGGCATTGCTCAAGGGTTGGCATATCTCCATCATGATTGTGATCCTCCCATAGTGCACTTTGCCATCGAGACAAAAAATATACTTCTGGATTCTGATATGGAGCCTCGCGTTGCTGGTTTCAGTGCTGCCCATTTTTTGTTTGAATTTGACACAACACCATCCTCATCTATTCTAGGCACATCAGGGACAGAAAATCTTTATGCAACAACAATCACTAGGGAGTTTGATGTGTACAGTTACGGGGTAGTTTTGCTTCAGCTGATAACAAGAAAGAAGGCAATAGACTCATCGTTTATGGGTGGGACTGAGATAGGGGTTTGGGTCAGAAGTCTGTGGGAGGAGACAGGAGACATTCATAAAATTGTTGATTCAAACCTTGCAGAGGAGGTATTGAATTCAAATTCCAATGTACACGAACAAGTCACCCAAGTGCTTTCCTTGGCTTTGAGATGCACGGAGGCAGATCCGTACATGAGACCTACTATGAAAGATGTTATCAAGCAATTAGCAGGTTTTGAATCCAAATTCAAGAGTACTCGAACAAGTGAACAAAGTGAGACTGCCTATGATAGATATATCGGGTTTTATTGA 3837 0.4107 MKLQFLLLCLFAPLYVASALSSDGLTLLSLLNHWTSAPPSLKLNWKSSDSTPCSWIGIQCNRYSNVVFINLTASQIIGQLGPEIGQLTHLQNLSLARNGFSGTIPVKLANCSLLVHIDLSENHFSGNIPPEIGNCKSLQSLRLYSNQLGGDIPNELGKLSKLEDLELYFNHLTGEIPLTIWKIRSLRHVLLHNNSLSGKLPSEMTELKHLKNISLFDNQLFGPIPQSLGINSSLVKLDLMNNKLTGDIPPNLCFGKQLRTLLLGLNQLQGGIPQDLGRCATLARLDLSDNNLSGPLPKFEGSNDLIYMDVSKNNISGVIPSSLGNCTDLTALILSMNNIIGPIPSELGNLLRLQVLNLAHNNLEAPLPQQLSYCTQMDTFDVGFNFINGSFPSSMRSWKALTILILRENRFSGVIPSFFSEYVQLLELQLGGNMFRGKIPTSIGSLQNLLYGLNLSANKLTGEIPLEIGKLEKLQILDISLNNLTGSIHALGDLSSLTEVNISHNSFVGALPEWNTQHLNLLPSSFIGNPGLCVRCSTSNASTCKKPSFLKPCASESTNHKGSKRSILFIALGSVVFVICLSVSLLIYDHHYGQQSEEVVLGQGFEEYLSFVRRRIYYNDIARALILGEGNADCEAQEAFDSDVKGEFRIVDLINATENLHDQYVIGVGGHGIVYKAELDFGIFAVKKVEFARSNRRKLNLIKEVEMTKKIRHQNVARCLGFLMGEEYGLTISRYRENGSLHDVLHESNPKPYLAWNVRYMIAIGIAKGLAHLHHSCDPPILHRDIKPKNILLDSDMQPYITDFGISLALNQSSTVVRMRSTYHIGTPGFMAPEIAYDVVPRCELDIYSYGVVLLELITRKKVLDSSFVEQQTTLAGWFKSTWTRTRTLEEIVDSSLTRELSDVHVKAQVIKTLLVALICVQKDPRKRLKMIDVVDFFETPTDPANFVQHDGASVHLGISLATAAASLFSEEKGGILPNSNNRHIVRRGTPGVLSKVELRTGEAVYVKKLLSAGYPSSITREEKMNRTVKHRNIIKLHRLWTEKDETFLMFEYLSNGSLHDVLHGKNPPPSLKWDVSYRIAIGIAQGLAYLHHDCDPPIVHFAIETKNILLDSDMEPRVAGFSAAHFLFEFDTTPSSSILGTSGTENLYATTITREFDVYSYGVVLLQLITRKKAIDSSFMGGTEIGVWVRSLWEETGDIHKIVDSNLAEEVLNSNSNVHEQVTQVLSLALRCTEADPYMRPTMKDVIKQLAGFESKFKSTRTSEQSETAYDRYIGFY 1278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1738g00002 1278 SUPERFAMILY Protein kinase-like (PK-like) 983 1251 IPR011009 -
Pral1738g00002 1278 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 131 228 - -
Pral1738g00002 1278 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 257 938 - -
Pral1738g00002 1278 SUPERFAMILY L domain-like 23 298 - -
Pral1738g00002 1278 ProSiteProfiles Protein kinase domain profile. 980 1258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00002 1278 Gene3D Ribonuclease Inhibitor 21 181 IPR032675 -
Pral1738g00002 1278 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 736 946 - -
Pral1738g00002 1278 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 256 542 - -
Pral1738g00002 1278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Pral1738g00002 1278 SUPERFAMILY L domain-like 273 522 - -
Pral1738g00002 1278 Gene3D Phosphorylase Kinase; domain 1 631 735 - -
Pral1738g00002 1278 Gene3D Transferase(Phosphotransferase) domain 1 1055 1275 - -
Pral1738g00002 1278 Gene3D Transferase(Phosphotransferase) domain 1 737 951 - -
Pral1738g00002 1278 SMART serkin_6 660 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00002 1278 SUPERFAMILY Protein kinase-like (PK-like) 647 937 IPR011009 -
Pral1738g00002 1278 ProSitePatterns Protein kinases ATP-binding region signature. 666 688 IPR017441 GO:0005524
Pral1738g00002 1278 ProSiteProfiles Protein kinase domain profile. 660 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00002 1278 Gene3D Phosphorylase Kinase; domain 1 981 1054 - -
Pral1738g00002 1278 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1054 1264 - -
Pral1738g00002 1278 Gene3D Ribonuclease Inhibitor 304 559 IPR032675 -
Pral1738g00002 1278 Pfam Protein kinase domain 662 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00002 1278 Pfam Protein kinase domain 993 1249 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00002 1278 Pfam Leucine rich repeat N-terminal domain 21 61 IPR013210 -
Pral1738g00002 1278 Gene3D Ribonuclease Inhibitor 182 303 IPR032675 -
Pral1738g00002 1278 FunFam Leucine-rich repeat receptor-like kinase 25 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1738g00002 Pral-Chr1738 46564 52205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1738g00002 66 956 Receptor kinase-like Gene Family AT1G17750 43.938 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1738g00002 Pkinase 3.4e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1738g00002 - - pcin:129288056 1848.56