Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1738g00001 ATGAGGGATGTCGTCGAATTCTTTGAAACGCCCACTGATCCAGGAATTTCCATTCAGCATGACAGAGCATTTCACCTAGGGGGTTCTCTTGCTACTGCAGCAGCCTCCATATTTTTTCAGGAGGAAGTCAAGATCACTGCCAATAGAGGTTCTTACCCAATTATTCACAAGCTGATGGCGCGTGATTTGAACAATTCAAATATTATTGGCAGAGGAGCTCATGGTGTTGTATATAAATATTCACTAGGAGCATCCCTAGTTTATGCTGTAAAGAAGGTTTCATTTGCTGGTAACAAAAGAAAGATTGTAAAGATAGCTAGAGAAATTGAAATCATTGCAAAGATTAGGCACCGAAATCTGGGCAGATTGCTAGACTTTTTGTTCATAAAGGACTGCTGTCTGATCTTGTACAATTACATGCCAAATGGAAACCTTCATGATGTTTTGCATGAAAAGAATCCACCGCCATGCCTAGAGTGGAATGTCCGGTATAGGATTGCTCTTGGAATTGCTCATGGGTTGGCTTATCTCCATTATGTTTGTCATCCTGCCATAGTGCACTGTGCCATCAAACCTAAAAATATACTTCTGGATTCTGATATGGATCCTCGTATTGCTAATTTTGGTGTTGCCAAGCTTTTGGATCAGTCTTCTTCTTCAACATCATCTTTACCAGTTCCAGGCACACAAGGGTATATAACACCAGAGAGCACATATACAACAGCAAATACCAGGGAGTTTGATGTTTACAGTTATGGGATAGTTTTGCTTCAGTTGATAACTAGAAAGAAGGCAGTAGATCCATCATTTATGAATGGAACTGAGATAGGAATTTGGGTCAGAACTCAATGGAGGGAAACAGGAGACATTAATACAATTGTTGATTCAAGCCTTGCAGAGGAGGTTTTGAAGTCAGATGTACTTGAACGAGTTACCATAGTGCTTTTGCTGGCTTTGAGTTGCACGGAGAAGAATCCGCACATGAGACCCACAATGAGAGATGTCATCAAGCAGTTAGAAGATGCTAATCCAAGGACAAGGAGTAAAAAGCTTCCAAGTTCCATCTCCTTAAAGACCCGTAGTTGA 1086 0.4079 MRDVVEFFETPTDPGISIQHDRAFHLGGSLATAAASIFFQEEVKITANRGSYPIIHKLMARDLNNSNIIGRGAHGVVYKYSLGASLVYAVKKVSFAGNKRKIVKIAREIEIIAKIRHRNLGRLLDFLFIKDCCLILYNYMPNGNLHDVLHEKNPPPCLEWNVRYRIALGIAHGLAYLHYVCHPAIVHCAIKPKNILLDSDMDPRIANFGVAKLLDQSSSSTSSLPVPGTQGYITPESTYTTANTREFDVYSYGIVLLQLITRKKAVDPSFMNGTEIGIWVRTQWRETGDINTIVDSSLAEEVLKSDVLERVTIVLLLALSCTEKNPHMRPTMRDVIKQLEDANPRTRSKKLPSSISLKTRS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1738g00001 361 ProSiteProfiles Protein kinase domain profile. 63 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00001 361 SUPERFAMILY Protein kinase-like (PK-like) 52 339 IPR011009 -
Pral1738g00001 361 MobiDBLite consensus disorder prediction 342 361 - -
Pral1738g00001 361 Pfam Protein kinase domain 65 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1738g00001 361 Gene3D Phosphorylase Kinase; domain 1 40 139 - -
Pral1738g00001 361 Gene3D Transferase(Phosphotransferase) domain 1 140 356 - -
Pral1738g00001 361 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 61 340 - -
Pral1738g00001 361 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 140 351 - -
Pral1738g00001 361 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1738g00001 Pral-Chr1738 14154 40486 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1738g00001 35 348 Receptor kinase-like Gene Family AT1G73080 50.932 3.03e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1738g00001 Pkinase 2.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1738g00001 - - pcin:129289575 491.5