Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1736g00006 ATGACGAGCGGCGGACTCCGAATTTTCTCGATCGCGTTCATCTTGAGATTCTTGACGCTGCTGTGCTTCGTCCTTTCGTTCTTCTTCGATTTCTGTGCCGCCGCAAGGCGGGACAATGTTCTGAGGAAAAGAGAGTCTTACAAATATAGTTCCATTAAGGAATTTGATAATTATATTAACGGTTCTTCTGGCGCGGCAGTGCATCGATCTAGTAGCCGCCACCACGTCACACATAAGAACGGTCGAAGATCTTCCGATCGTGATGATTCAGGTCCTGGACGAACTGAGTCTTATGGTAAAAAAGAACAGAGCGAGCAGGGTAAGTTGCATGGAGATAATGGGAAATATGCACCTGCATCTGTGTTTCAGGAAGATTGTGGTGAAGTTGTGGACGCTGAAACTCATGCACCACCGGGGAAGAGAAGAAAAATATCTCCAATTGTCTGGAACTTAGCAGAAAAGGAGGTAAAAATATCTGATAACAGGACAGCACAAGCGACTGCTTTGTCTCCCTTTTGTCCATCCCGACAAAGCTCTCATGGGATCACTGGTCTATTTTATGGCGGAGCTGTTAATTCCGAATCTCCTGCTGATTCCTCTAGTGCATTACCTCAAGGACGTTCAGACAATGAGGGTGAATATGTTGATCAGTCTGATAAGAAACACGTGCAAGGTTGGAATATCACAATGTCAAGATGGTTGTCGGATGATTATTCCCCACCGAATGCATCTGATGATGATTACATGGATGGAAAAGAGACGTCAAGCCCAGAAAGTGGTGAGTTCATATGTGAAAGTTCTGAAGGCAAAAAATCCATATCATCAAGAAATAGTGCAGGAGTTGATTGTTGCTGCACATCAAGTAATAAAGAAGTTAATAGTTCCGAAAAGGAATTACTTGTGGATACTATGGATGATGATGAGGAAGATAGTGAAACTTCTAATGTTACTCACCCTTCATCAGATCCTGAAGACGGGGGCAGTTTAATAGTGGTGCCGAGAAACATAAACAGCATCCAGAGCTGCAGAAGTGTTTTAGAATTTGAAATGATCAAGAAAATAAACGAAGGAACTTATGGTATTGTCTACAAAGCTAAGGATAAGAAAACCGGGGAAATTGTAGCATTAAAGAAGGTGAAGATGAATATGGATAGAGATGGCTTTCCATTGTCCTCTTTGAGGGAAATAAATATTCTCTCATCTTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTTGTTGTGGATGATTTTGATGGTGTTTTTATGGTAATGGAGTATATGGAGTATGACCTTAAAGGGCTGATACAGAAGATGAAGCGACCATTTAGTATAGGTGAAGTAAAATCCTTGATGATGAAACTTCTCAAGGGTGTGAAGTATCTCCATGACAATTGGGTTCTTCACAGAGACTTGAAGACATCAAATATTCTGTTAAATGAGGAGGGTGAGCTAAGAATATGTGACTTTGGTTTATCTCGCCATTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTCTGTGGTACAGGGCTCCTGAGCTTCTGCTAGGTGCTAAGGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCCAAGTCGCCTCTATTCCAGGGAAAATCTGAAATTGAGCAGCTTAATAACATTTTCCAAACCTTGGGCACACCTAATGAAAAGATTTGGCCAGGAGTATCCAAATTATCTGGATTTAAGCCCAATTTTGTGAAGCAGCCGCACAATCTGTTGCGGAAGAAGTTTCCAGCTGCATCCTTCATTGGGTCACCTGTTCTTTCTGAATTGGGATTTGACTTGTTGAGCAAGCTTCTGACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCGTGAAGCCCCTCTTCCCAAATCTGACTTCAATATCACATTACCTTCACAGCATTGCTAG 1974 0.4184 MTSGGLRIFSIAFILRFLTLLCFVLSFFFDFCAAARRDNVLRKRESYKYSSIKEFDNYINGSSGAAVHRSSSRHHVTHKNGRRSSDRDDSGPGRTESYGKKEQSEQGKLHGDNGKYAPASVFQEDCGEVVDAETHAPPGKRRKISPIVWNLAEKEVKISDNRTAQATALSPFCPSRQSSHGITGLFYGGAVNSESPADSSSALPQGRSDNEGEYVDQSDKKHVQGWNITMSRWLSDDYSPPNASDDDYMDGKETSSPESGEFICESSEGKKSISSRNSAGVDCCCTSSNKEVNSSEKELLVDTMDDDEEDSETSNVTHPSSDPEDGGSLIVVPRNINSIQSCRSVLEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMDRDGFPLSSLREINILSSFNHPSIVEVKEVVVDDFDGVFMVMEYMEYDLKGLIQKMKRPFSIGEVKSLMMKLLKGVKYLHDNWVLHRDLKTSNILLNEEGELRICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKPNFVKQPHNLLRKKFPAASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFREAPLPKSDFNITLPSQHC 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1736g00006 657 Gene3D Phosphorylase Kinase; domain 1 333 429 - -
Pral1736g00006 657 MobiDBLite consensus disorder prediction 193 207 - -
Pral1736g00006 657 ProSiteProfiles Protein kinase domain profile. 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1736g00006 657 FunFam cyclin-dependent kinase G-2 isoform X1 333 429 - -
Pral1736g00006 657 SUPERFAMILY Protein kinase-like (PK-like) 347 644 IPR011009 -
Pral1736g00006 657 Pfam Protein kinase domain 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1736g00006 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 467 479 IPR008271 GO:0004672|GO:0006468
Pral1736g00006 657 MobiDBLite consensus disorder prediction 66 115 - -
Pral1736g00006 657 MobiDBLite consensus disorder prediction 233 274 - -
Pral1736g00006 657 MobiDBLite consensus disorder prediction 193 221 - -
Pral1736g00006 657 MobiDBLite consensus disorder prediction 81 109 - -
Pral1736g00006 657 MobiDBLite consensus disorder prediction 303 330 - -
Pral1736g00006 657 FunFam Cyclin-dependent kinase G-2 430 657 - -
Pral1736g00006 657 CDD STKc_CDC2L1 342 638 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pral1736g00006 657 SMART serkin_6 348 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1736g00006 657 PANTHER CELL DIVISION PROTEIN KINASE 347 644 - -
Pral1736g00006 657 Gene3D Transferase(Phosphotransferase) domain 1 430 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1736g00006 Pral-Chr1736 25463 30822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1736g00006 339 644 Core Cell Cycle Gene Families AT5G10270 45.706 2.88e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pral1736g00006 Pkinase 4.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1736g00006 K08818 - gmx:100788840 640.573