Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1735g00003 ATGGAAATGCAAGCCTATAAATTGGAATTATGTGTCTTGCTAATCTTCAATTGCGTGAAGTGGGTTCAATTGCAGAGAAACACGAGAGATCCAGATCCGCCAAGCGTAACAGCGATCACAACAATTGCTAGCAGATCAAACCCAGGACCAGCAACAGCGAGGACGATTAGGTACAGAGAATGCTTGAAGAATCATGCGGCGAGCATGGGAGGACACGTAGTGGATGGATGCGGCGAGTTCATGCCAAGTGGAGAAGAAGGCACTCCACAATCCTTGAGATGTGCCGCTTGTGACTGCCACCGCAATTTCCACCGGAAAGAGACCGAAGGTGAACCTCAAACTAATGTTCTCAATTACTACGCCTACCCTCCCAGCAAAAGCAATAACGCACAGAGTAGGATTCTTTCTCCGCAGTTTCCGCCACCCCCTCCTCTTCATCATCATCATCACCATCAACATATGAGATTTTCAGGTGGGTCGTTCCCGCCGTTGATGATGGCCTTCGGCGGAGGCGGCGGGGCGGCGGAGTCTTCAAGCGAAGATCTGAACATGTTTCAGTGTAATGATGTGGGAGGGCAAGGGTCATCAAAGAAAAGGTTTAGGACTAAGTTTAGCCAGGAGCAGAAGGACAGGATGATGGAGTTCGCCGAGAAGTTGGGATGGAGGATCCAGAAACACGACGAACAAGAAGTACAACAGTTTTGTAATCAAGCGGGTGTGAAACGGCAGGTTTTCAAGGTTTGGATGCACAATAACAAACAGGCCATGAAGAAGAAGCAAATCTATCGACTGTTTTTTGTCTCCGCTCTACCCCAGCGAGCCAGGCAGATAAATAGCCCCCCCTAA 846 0.4905 MEMQAYKLELCVLLIFNCVKWVQLQRNTRDPDPPSVTAITTIASRSNPGPATARTIRYRECLKNHAASMGGHVVDGCGEFMPSGEEGTPQSLRCAACDCHRNFHRKETEGEPQTNVLNYYAYPPSKSNNAQSRILSPQFPPPPPLHHHHHHQHMRFSGGSFPPLMMAFGGGGGAAESSSEDLNMFQCNDVGGQGSSKKRFRTKFSQEQKDRMMEFAEKLGWRIQKHDEQEVQQFCNQAGVKRQVFKVWMHNNKQAMKKKQIYRLFFVSALPQRARQINSPP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1735g00003 281 Gene3D - 186 258 - -
Pral1735g00003 281 ProSiteProfiles 'Homeobox' domain profile. 195 259 IPR001356 GO:0003677
Pral1735g00003 281 FunFam Zinc-finger homeodomain protein 2 185 258 - -
Pral1735g00003 281 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 45 255 - -
Pral1735g00003 281 MobiDBLite consensus disorder prediction 127 155 - -
Pral1735g00003 281 NCBIfam homeobox domain, ZF-HD class 197 254 IPR006455 -
Pral1735g00003 281 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 57 107 IPR006456 -
Pral1735g00003 281 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Pral1735g00003 281 Pfam ZF-HD protein dimerisation region 56 108 IPR006456 -
Pral1735g00003 281 SUPERFAMILY Homeodomain-like 188 258 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1735g00003 Pral-Chr1735 10542 21599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1735g00003 46 261 ZF-HD Transcription Factor Family AT2G18350 53.571 9.48e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pral1735g00003 ZF-HD_dimer 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1735g00003 - - vvi:100258112 283.108