LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral1733g00009	ATGGGAGGTCTTCAATTCCCTAGAGTTCATACCTCTCTGTTTCTTCCTCTTTTTCTCGTTCAGTTGGCATGGTTTCAGTCTCCCTCATCGGCATACACCGTCCCCGATAAGTATTTTATCAGCTGTGGGTCAAATAACAACGTAACAGACACAGAAAGTGGTCGGGTTTTCGCGGGGGATTCTTCTCTTTCCTTGTCCTTTCCAAAGCAGAGTAGCGCCGTGGAAGCGGGCACTCAGTCATCGGCCGTATCTCCTATCTACCAAACGGCAAGGGTCTTCCAACAGAAATTCTCGTACGAATTCACAACAGACACTTCTGGCTCTTATCTGGTACGCCTTCATTTCTTTGCTTTCCATTCCTCAAGCAATCTCCCCTCTGCTCGCTTTAATGTTTCGGTTCCTGGGTTCTGGCTCTTGCAAAATTTCGCTGCCAAAAATGCTAGCAATTCTCCTTTAGTGAAAGAATTCTTCATAAGCATCAATGCCACCGACTTCAAAATCACTTTCAGGCCTCTGGAATCATCATTTGCATTTGTTAATGCCATAGAACTCTTCCTTCTCCCCGATAATTTCATTCTAGATTATGTTCCGACCGTGACACCCAGTGGCGATTCTGCGAATTACGCGGGTTTGCAGTCTCGGGGGTTACAGATGACTTACAGGCTTAATGTTGGGGGCCCTAATGTCTCAAGAAGCCAGGATGAACTTTTTAGATTCTGGGAAATAGACGATCCTTATTTGTCTAACCCGCGGGCTGCTGATACTAACAGGTCCACTGTTGATATTCAATACCGGGACGTAAATTCTGGATCTGATGTTGTTTATTGGGCTACCAAGTATACTGCCCCGAACAGTGTTTACCTAAGTGACAAAAAGGTTCATTTGAATGCCAATGCTTCTGCCTCTGATTTCCTTAACATAACCTGGGGTCTTGCTGTAGAAAAGAAAGCTAATTATCTTGTTCGGGTTCACTTCTGTGACTTGGAGAGTTCTTCTCCTAATCTTACATACTTCAATCTATTCATCTACAACAACTCCCGCTCAATGATCAATTCCATCAACATATCTAACCAGTTGCCTGTTCCATTTTATTATGATTATGTGGTCAATACTGATGCCTCTGGATTCGTGACTATCAGCATAGCACCTCTTCCTTCTCCAGTTCCAAATACGTATCTGAACGGCCTAGAAATTATGAGAATTATTGATTCTTCAAATTCCGTACCGTTGGAGGAATCAAATGTGAATAAGCATCTCCCTCTCGTGTTGGGTTTATCGCTTGGAGTTGGAGGTTCCGTCCTAATTTCTATTATACTGGTTGGGCTAATTTGGCGGGCGAAGTTTATGAAGCAACAACCTAAGCCTGTTGATAATCCAGACTGGTTACCATTGCCGTTTTATGGAGGAGGAAGTTCTCACAGCAGATTGACTGAAGAAACTTCCCATGGCTCTCCTCTTCCAAACTTAAATCTTGGGCTCAAAATCCCTTTCGTTGAGATCCAATCTGCAACCAACAACTTTGATACAAAAAGATTAATTGGAAAGGGCGGTTTTGGCAACGTTTACAAGGGAGTTCTCAGGAATGGTTTGAGAGTGGCTGTGAAAAGAAGTGAGCCTGGGTCAGGACAAGGCCTTCCAGAATTCCAGACAGAGATTATGGTTCTGTCCAAAATTCGACACAGGCACCTTGTTTCCTTGATTGGGTATTGTGATGAAAGGTCTGAAATGATTTTAGTTTATGAATATATGGAAAAAGGGACACTGAGGGATCATTTGTACAATTCAAATCTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAGATTTGCATTGGAGCTGCGGGGGGTCTTCATTACCTTCACAAAGGAGCATCAGGGGGCATCATTCACCGAGACGTTAAGTCTACAAATATATTGCTTGATGAAAACCATGTTGCTAAAGTTGCTGACTTTGGCCTCTCAAGAACAGGCCCTCTTGATCATCAACCTTATGTCAGCACCGGTGTTAAAGGCACCTTTGGGTATCTAGATCCTGAGTATTTTCGGTCACAACAGTTAACAGAAAAATCTGATGTTTACTCATTTGGCGTGGTACTTCTTGAAGTGTTATGTGCAAGACCAGCCATTGAACCTATGCTGCCACGGGAGCAGGTGAACTTGGCTGAATGGGGACTCCTTTGCAAAAACAAAGGAATGCTCCAAGAGATTATAGATCCTTCCATCAAGGGGCAAATAGATCCAAACTCACTCAGGAAATTTAGCGAGACAGTGGAGAAATGTTTACAAGAAGATGGCTCTGATAGGCCTAGCATGGGTGACGTATTGTGGGACCTGGAGTATGCACTACAGCTTCAGCGAGGCTCAATTCAGAGAGAACCCCATGAGGACAGCTCTAGTGGTGCTTCTGCATCAATTCAACTGCCCAGTGTTCGTCGACTTCCTTCACTTTCTACACTTGGTGAATCAGGTGATATGTCCATGGTAAGGGAAGACGAATCTGATAACACAGTGGGTTCAGTTTTCTCACAGTTGAAAATTGATGATGCGAGATAG	2550	0.4388	MGGLQFPRVHTSLFLPLFLVQLAWFQSPSSAYTVPDKYFISCGSNNNVTDTESGRVFAGDSSLSLSFPKQSSAVEAGTQSSAVSPIYQTARVFQQKFSYEFTTDTSGSYLVRLHFFAFHSSSNLPSARFNVSVPGFWLLQNFAAKNASNSPLVKEFFISINATDFKITFRPLESSFAFVNAIELFLLPDNFILDYVPTVTPSGDSANYAGLQSRGLQMTYRLNVGGPNVSRSQDELFRFWEIDDPYLSNPRAADTNRSTVDIQYRDVNSGSDVVYWATKYTAPNSVYLSDKKVHLNANASASDFLNITWGLAVEKKANYLVRVHFCDLESSSPNLTYFNLFIYNNSRSMINSINISNQLPVPFYYDYVVNTDASGFVTISIAPLPSPVPNTYLNGLEIMRIIDSSNSVPLEESNVNKHLPLVLGLSLGVGGSVLISIILVGLIWRAKFMKQQPKPVDNPDWLPLPFYGGGSSHSRLTEETSHGSPLPNLNLGLKIPFVEIQSATNNFDTKRLIGKGGFGNVYKGVLRNGLRVAVKRSEPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERSEMILVYEYMEKGTLRDHLYNSNLPSLPWKQRLEICIGAAGGLHYLHKGASGGIIHRDVKSTNILLDENHVAKVADFGLSRTGPLDHQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARPAIEPMLPREQVNLAEWGLLCKNKGMLQEIIDPSIKGQIDPNSLRKFSETVEKCLQEDGSDRPSMGDVLWDLEYALQLQRGSIQREPHEDSSSGASASIQLPSVRRLPSLSTLGESGDMSMVREDESDNTVGSVFSQLKIDDAR	849

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral1733g00009	849	FunFam	Putative receptor-like protein kinase	37	188	-	-
	Pral1733g00009	849	FunFam	receptor-like protein kinase FERONIA	471	582	-	-
	Pral1733g00009	849	ProSiteProfiles	Protein kinase domain profile.	507	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1733g00009	849	Gene3D	Phosphorylase Kinase; domain 1	472	582	-	-
	Pral1733g00009	849	SMART	serkin_6	507	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral1733g00009	849	PANTHER	OS07G0166700 PROTEIN	494	784	IPR045272	GO:0004714\|GO:0006468
	Pral1733g00009	849	MobiDBLite	consensus disorder prediction	793	821	-	-
	Pral1733g00009	849	Gene3D	Transferase(Phosphotransferase) domain 1	583	800	-	-
	Pral1733g00009	849	SUPERFAMILY	Protein kinase-like (PK-like)	487	778	IPR011009	-
	Pral1733g00009	849	FunFam	Receptor-like protein kinase FERONIA	583	799	-	-
	Pral1733g00009	849	MobiDBLite	consensus disorder prediction	787	849	-	-
	Pral1733g00009	849	Gene3D	-	37	186	-	-
	Pral1733g00009	849	Gene3D	-	216	401	-	-
	Pral1733g00009	849	CDD	STKc_IRAK	513	778	-	-
	Pral1733g00009	849	ProSitePatterns	Protein kinases ATP-binding region signature.	513	535	IPR017441	GO:0005524
	Pral1733g00009	849	Pfam	Protein tyrosine and serine/threonine kinase	509	774	IPR001245	GO:0004672\|GO:0006468
	Pral1733g00009	849	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	627	639	IPR008271	GO:0004672\|GO:0006468
	Pral1733g00009	849	Pfam	Malectin-like domain	40	400	IPR024788	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral1733g00009	Pral-Chr1733	40120	43197	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral1733g00009	12	849	Receptor kinase-like Gene Family	AT2G23200	45.402	0.0	672

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral1733g00009		Malectin_like	3.1e-35	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral1733g00009	-		-	qsa:O6P43_033868	945.266