Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1733g00001 ATGAAACAGATGAGAAAACCCATCAACGAACGTGCAGATGATGGCTCAAAGACAATGGGCCACTTCGTAAGTGTGGCTGGAGAGGGTAACTTCGGAGAATGGTTGAGTTTAGGAGTCAAGAAAGGCATTCCTGAGGAAGTTGATCAAACTCAAAACCCAAATCCCCAGTCAAAACGTCTCAAGAACAGGTTGTTCTCATGCAATTTCTGCATGAGGAAGTTTCATAGTTCACAGGCCTTAGGGGGTCACCAGAATGCGCACAAGAGAGAAAGAAGAGCAGCCAGAAGGGACCAAACTCAAAAGACGATAGTGACGATGATGAAGACTACAATCGGCTTACCGTGCACTTCTTTGGCAGCCAAGTCTCTGGGTCTCCATGCCCATTCGCTTACGCACAAACCAAGCAGGGAAGGGTCTGCTGTGGCTGCTCTTTCTGGAGTTGCCAATTCTGGCTCTGGGTTTGGAATGGCATGGCCACCTCTTATGATAGAACAAGCCATGGATTTGATTTGGCCCGGGAGCTTTCGGGTTAATTTACCAAAGCAACCATCTGATGGAAGTAAGCTTGACTTAGATCTTCGTCTATGA 588 0.4728 MKQMRKPINERADDGSKTMGHFVSVAGEGNFGEWLSLGVKKGIPEEVDQTQNPNPQSKRLKNRLFSCNFCMRKFHSSQALGGHQNAHKRERRAARRDQTQKTIVTMMKTTIGLPCTSLAAKSLGLHAHSLTHKPSREGSAVAALSGVANSGSGFGMAWPPLMIEQAMDLIWPGSFRVNLPKQPSDGSKLDLDLRL 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1733g00001 195 SUPERFAMILY beta-beta-alpha zinc fingers 62 92 IPR036236 -
Pral1733g00001 195 ProSitePatterns Zinc finger C2H2 type domain signature. 67 87 IPR013087 -
Pral1733g00001 195 Gene3D Classic Zinc Finger 45 121 - -
Pral1733g00001 195 PANTHER ZINC FINGER PROTEIN 4-LIKE 26 195 - -
Pral1733g00001 195 ProSiteProfiles Zinc finger C2H2 type domain profile. 65 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1733g00001 Pral-Chr1733 814 1401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1733g00001 63 147 C2H2 Transcription Factor Family AT1G80730 46.078 1.94e-18 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1733g00001 - - pcin:129321428 258.455